Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g05784 | ATGGGAGATGTGGCTAAGGACCTTACTGCTGGAACTATTGGTGGGGCAGCACAACTAATAGTTGGTCACCCATTTGACACCATAAAGGTCAAGCTCCAAAGTCAGCCTACACCACTTCCTGGCCAGGTTCCGAAATATTCCGGTGCAATTGATGCTGTCAAGAAGACAATAGCAGCTGAAGGTCCAGGGGGTTTATACAAAGGCATGGGAGCACCATTTGCTACCGTAGCCGCCTTCAATGCTGTCCTATTTACAGTTAGAGGACAAATGGAAACATTGTTGAGATCATCTCCTGGTGATACCCTCACAATAAACCAGCAGGTTGTTTGTGGAGCTGCAGCTGGACTTTCTGTTTCCTTCCTAGCTTGTCCTACTGAACTGCTCAAATGCAGGTTACAAGCACAGAGCGCACTCGCTGGTTCAGGAACAGCAACATTGGCGGTGAAATATGGCGGACCAATGGATGTGGCCAGACATGTTCTCAGATCAGAAGGCGGCATAAAGGGTCTTTTCAAAGGAGGCACCGACACCTCAGGACTTGGTAGAGGCTCTCTGATGGCTTCCGGAGGCTTGGCCGGCGCTGCTTTTTGGTGTATGGTCTATCCAACTGATGTTGTTAAGAGTGTGTTGCAAGTTGATGATTACAAAAATCCAAAGTTTTCTGGTTCAATTGATGCTTTCAGAAGGATAAAAGCCACTGAGGGAATTAAAGGCCTTTACAAAGGTTTTGGTCCTGCAATGTTCAGAAGTGTTCCTGCAAATGCAGCATGTTTCTTGGCATATGAGATGACAAGATCAGCTTTGGGATGA | 810 | 0.4691 | MGDVAKDLTAGTIGGAAQLIVGHPFDTIKVKLQSQPTPLPGQVPKYSGAIDAVKKTIAAEGPGGLYKGMGAPFATVAAFNAVLFTVRGQMETLLRSSPGDTLTINQQVVCGAAAGLSVSFLACPTELLKCRLQAQSALAGSGTATLAVKYGGPMDVARHVLRSEGGIKGLFKGGTDTSGLGRGSLMASGGLAGAAFWCMVYPTDVVKSVLQVDDYKNPKFSGSIDAFRRIKATEGIKGLYKGFGPAMFRSVPANAACFLAYEMTRSALG | 269 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g05784 | 269 | Gene3D | Mitochondrial carrier domain | 2 | 176 | IPR023395 | - | |
Vifa1g05784 | 269 | Pfam | Mitochondrial carrier protein | 4 | 95 | IPR018108 | - | |
Vifa1g05784 | 269 | Pfam | Mitochondrial carrier protein | 186 | 268 | IPR018108 | - | |
Vifa1g05784 | 269 | Pfam | Mitochondrial carrier protein | 102 | 173 | IPR018108 | - | |
Vifa1g05784 | 269 | SUPERFAMILY | Mitochondrial carrier | 3 | 262 | IPR023395 | - | |
Vifa1g05784 | 269 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 2 | 93 | IPR018108 | - | |
Vifa1g05784 | 269 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 180 | 267 | IPR018108 | - | |
Vifa1g05784 | 269 | PANTHER | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED | 183 | 268 | - | - | |
Vifa1g05784 | 269 | Gene3D | Mitochondrial carrier domain | 177 | 269 | IPR023395 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g05784 | Vifa-Chr1 | 901470715 | 901471721 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g05784 | 22 | 263 | Antiporters | AT1G79900 | 30.403 | 4.32e-28 | 107 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g05784 | K15109 | - | gmx:100781634 | 457.988 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vifa1g05784 | 1 | 901470715 | 901471721 | Vifa1g05784 | 1 | 901470715 | 901471721 | ECH |