Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g05730 | ATGAAATCGGTGATTGAAAGGTATAACAGTTTCAAGGAAGACCAAGTGACAAATCCAGAATCTGAAGTCAAGTTTTGGCAAAGGGAGTCTGAAATTTTAAGGCAGCAACTACAGACTCTACAAGAAAACCATCGGCAATTGATGGGAGGACAACTTTACGGTTTGAGCATCAGAAACCTACAAGATCTTGAGAGACAACTGGAACTTAGTCTCCAAGAAATCCGAATGAGAAAGGAGAAAATTCTGACAGACGAAATCCACGAGCTGAACCAAAAGGGAAACCTAATCCATCAAGAAAATGTGGAACTTTATACGAAGGTAAACCTCATTCAACAACAAAACACACAACTACACTGCGGAACAATAGAGGTTTATGGCACAACAGATTCGGCCACACTTGCACCAAGCAAAAATGCATTTGCTCAGTTTCCATATGGCAGCGGCGGAGGAGAGTATCCACAAACATTATTTCAACTTCAGTTATGCCAGCCTGAGCAAGAACAGTACTGCGAAACCTCAGGTAGTGCAACTGCAACAAAATGA | 543 | 0.4162 | MKSVIERYNSFKEDQVTNPESEVKFWQRESEILRQQLQTLQENHRQLMGGQLYGLSIRNLQDLERQLELSLQEIRMRKEKILTDEIHELNQKGNLIHQENVELYTKVNLIQQQNTQLHCGTIEVYGTTDSATLAPSKNAFAQFPYGSGGGEYPQTLFQLQLCQPEQEQYCETSGSATATK | 180 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g05730 | 180 | ProSiteProfiles | K-box domain profile. | 23 | 113 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Vifa1g05730 | 180 | Coils | Coil | 23 | 43 | - | - | |
Vifa1g05730 | 180 | Coils | Coil | 57 | 80 | - | - | |
Vifa1g05730 | 180 | Pfam | K-box region | 18 | 107 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g05730 | Vifa-Chr1 | 890417655 | 890418526 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g05730 | 1 | 175 | MADS-box Gene Family | AT2G22630 | 47.458 | 6.84e-46 | 149 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g05730 | K09264 | - | gmx:100795778 | 206.068 |