Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05708 ATGGCTTCATCCTCCAAGCCGACCCCTCTGTTGAAAGACGAACTCGACATCGTCATCCCCACGATCCGGAACCTTGATTTTCTGGAGATGTGGAGACCCTTTTTTGAACAGTATCATCTCATCATTGTTCAAGATGGGGACCCGTCTAAGGTTATCAAGGTTCCTGAAGGTTTTGATTATGAGCTGTATAATCGGAATGATATTAATAGGATCTTGGGTCCTAAGGCGAGTTGCATCTCCTTCAAGGATTCTGCTTGTCGTTGCTTTGGGTATATGGTTTCTAAGAAGAAGTATATCTACACCATTGATGATGATTGCTTTGTTGCCAAAGACCCAACTGGCCATGAAATCAATGCACTTGAGCAGCACATTAAGAATCTCCTTAGTCCATCCACTCCATTTTTCTTCAACACCCTTTATGATCCATACAGAGAAGGTACTGATTTCGTCCGTGGATACCCTTTCAGTCTTCGTGAAGGTGTCCCCACTGCCGTTTCTCACGGCCTTTGGCTCAACATACCTGATTATGATGCTCCAACACAGCTTGTCAAGCCCCATGAGAGGAACACTAGGTTTGTTGATGCTGTTATGACCATTCCCAAAGGAACTCTGTTTCCCATGTGCGGTATGAATCTGGCATTCAACCGGGAACTGATTGGACCTGCAATGTACTTTGGACTTATGGGCGATGGTCAGCCTATTGGACGTTATGACGATATGTGGGCTGGCTGGTGCATAAAGGTTATCTGTGACCACTTGGGATATGGAGTGAAAACTGGACTGCCATACATATGGCACAGCAAAGCAAGCAACCCATTTGTTAATCTGAAAAAGGAGTACAAAGGTATCTTCTGGCAAGAAGAGATCATTCCATTTTTCCAAGCTGCAACCCTTTCAAAAGATTGCACCTCTGTTCAGAAATGCTACATTGAACTCTCCAAGCAAGTCAAGGAGAAACTTGGAACTATTGATCCCTATTTCGTCAAACTTGCTGACGCCATGGTCACTTGGGTTGAAGCTTGGGATGAGATTAATAACACCGTCTCTGAAGAGACAACTTCAACCAAAGCTTCTGAGGTTGCTGCTACCAAGTGA 1095 0.4447 MASSSKPTPLLKDELDIVIPTIRNLDFLEMWRPFFEQYHLIIVQDGDPSKVIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPTGHEINALEQHIKNLLSPSTPFFFNTLYDPYREGTDFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPHERNTRFVDAVMTIPKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQPIGRYDDMWAGWCIKVICDHLGYGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIPFFQAATLSKDCTSVQKCYIELSKQVKEKLGTIDPYFVKLADAMVTWVEAWDEINNTVSEETTSTKASEVAATK 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05708 364 PIRSF UPTG 5 349 IPR004901 GO:0016866|GO:0071669
Vifa1g05708 364 Pfam Reversibly glycosylated polypeptide 11 345 IPR037595 -
Vifa1g05708 364 SUPERFAMILY Nucleotide-diphospho-sugar transferases 38 247 IPR029044 -
Vifa1g05708 364 PANTHER UDP-ARABINOSE MUTASE 6 347 IPR037595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05708 Vifa-Chr1 885280250 885282681 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05708 K13379 - gmx:100788017 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g05708 1 885280250 885282681 Vifa1g05708 1 885280250 885282681 ECH