Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05677 ATGCCAACCCTCACCAATTTCTACACCATCCAAGATGCATCCCACCACAAAACAGAAGACGACTGCTGGATCATTGTCGATGGAAAGGTATACGATGTGACACAATATTTGGAAGATCATCCCGGTGGAGATGATGTAATCCTCGCTGCAACCGGGAGAGATGCAACTGAAGATTTTGAAGATGCTGGCCACAGCAAAAGTGCAAGAGAACTTATGGAGAAATATTACATCGGTGAATTTGACACTTCGTCTACGATTTCAACCAAGAAAGTTGTTGTTGCTGCTGAAAATGAAGCATTGCAACAAATTTTGTATTGCTTGAAACATAGAAAATATTTTAGAAAAACTGGCTTATTTCCTAACAACAATAAGAGCAACAATTGA 384 0.3958 MPTLTNFYTIQDASHHKTEDDCWIIVDGKVYDVTQYLEDHPGGDDVILAATGRDATEDFEDAGHSKSARELMEKYYIGEFDTSSTISTKKVVVAAENEALQQILYCLKHRKYFRKTGLFPNNNKSNN 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05677 127 SMART Cyt_b5_2 8 81 IPR001199 -
Vifa1g05677 127 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Vifa1g05677 127 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Vifa1g05677 127 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Vifa1g05677 127 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Vifa1g05677 127 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Vifa1g05677 127 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Vifa1g05677 127 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 86 IPR036400 -
Vifa1g05677 127 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 80 IPR001199 -
Vifa1g05677 127 Gene3D - 3 86 IPR036400 -
Vifa1g05677 127 PANTHER CYTOCHROME B5 5 97 - -
Vifa1g05677 127 FunFam Cytochrome b5 type B 3 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05677 Vifa-Chr1 879020992 879023735 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g05677 1 84 NADPH P450 reductases AT1G26340 66.667 2.91e-43 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05677 K23490 - gmx:100500537 159.844