Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05618 ATGAAGATGGAGAAATATCCGAGAGATCTGTTAGAGAGACTCTGTGTTTCAAGTGGTGGAAGTGATGATAATATTCATAGAACAACAACAACAACAACAACAAGAACAAGAACAGCACAACAAACACAGAACGCGCAACATCATCATCAACAGTATCATCAATATCTTCGTGAGAACGAGCATGGTGAACAAGAAGAAGAGGAAGAAGAGGATGAAGATGAAGGGATTGAACTGAATCTTGGTCTTTCATTAGGTGGTAGATTTGGTGTTGACAAGCATGCTAAGAATAAGAAGCTTATTAGATCTTCTTCCGTTGTTGGAACAATGCCTTTGCTCCGGGAAGATATTGCGGCGGCTGCCGGAGTGGCTTCGCCGACTCCGGCGTATCCGACTCTTATGAGAGCTTCGTCGTTACCGACGGAGACAGAAGAGGAGTGGAGGAAGAGGAAGGAGTTGCAGACGCTGCGGAGGATGGAGGCTAAGAGACGGAGGTCAGAGAAGCAGAGAGTTTCCATTTCAAAGTCAGAGAAAGATTCCATTTCCACGGTGGCACCTATTGGTGGTGGTGGAGGTGGTTGTTCAGAGGAAGTGGAGGGTGGTGGTGGTGGTGCAACAATGGTGTTGAACAGATCATCAACAGTTGCTACTATGCTACCTTTTGGATTACCCAATTGGGCTGTTGCATCAAAGCAAGTTGTTGTTGGTGATGTGTTAGGGAAAGGGAAAATTGGGGTTGGTTTTCAAGGATTGATGTTTGCACAACCATCTTCTCAAGGTTCAGTAGAATCACAAGGTGGAAGTTCTTCATCAGTCTCTGAAATGGATAGCAAACCTTTTCTAGGATCAAGCAGTTGTGGTGAAGCAAGAAGCCCAGCTAGCAATCAGTCCTTACAGGAAAGAAGCAACCAGGACTCCCTCGGTTCATCAGGAGTGCCAAAGACAAAAGAGAATTTGACAAGAACAACTTCAAGATCCGAGATAATGGAGAATGCATCTAAAAAACCTCTTCCTAATCAAAATATTGGGAAGGAAATTGGAACAAACTCAATGGAAGACATGCCTTGTGTATTTACAAAAGGGTGTGGTCCTAATGGAAGAAGAATTGAGGGAATCTTATATAAATATGGCAAAGGGGAAGAAGTGAGGATAATGTGTGTGTGCCATGGAAACTTTCTGTCTCCTGCTGAGTTTGTTAAGCATGCTGGTGGTGAAGATGTTGCTCATCCTCTTAGACATATTGTTGTTAACCCTTCTGCAGCTCCCTTTTTGTGA 1272 0.4387 MKMEKYPRDLLERLCVSSGGSDDNIHRTTTTTTTRTRTAQQTQNAQHHHQQYHQYLRENEHGEQEEEEEEDEDEGIELNLGLSLGGRFGVDKHAKNKKLIRSSSVVGTMPLLREDIAAAAGVASPTPAYPTLMRASSLPTETEEEWRKRKELQTLRRMEAKRRRSEKQRVSISKSEKDSISTVAPIGGGGGGCSEEVEGGGGGATMVLNRSSTVATMLPFGLPNWAVASKQVVVGDVLGKGKIGVGFQGLMFAQPSSQGSVESQGGSSSSVSEMDSKPFLGSSSCGEARSPASNQSLQERSNQDSLGSSGVPKTKENLTRTTSRSEIMENASKKPLPNQNIGKEIGTNSMEDMPCVFTKGCGPNGRRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHAGGEDVAHPLRHIVVNPSAAPFL 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05618 423 MobiDBLite consensus disorder prediction 255 279 - -
Vifa1g05618 423 MobiDBLite consensus disorder prediction 158 174 - -
Vifa1g05618 423 PANTHER AFP HOMOLOG 2 6 419 IPR031307 GO:0007165
Vifa1g05618 423 Pfam Ethylene-responsive binding factor-associated repression 71 107 IPR012463 -
Vifa1g05618 423 Coils Coil 148 168 - -
Vifa1g05618 423 MobiDBLite consensus disorder prediction 158 192 - -
Vifa1g05618 423 MobiDBLite consensus disorder prediction 286 340 - -
Vifa1g05618 423 Coils Coil 52 72 - -
Vifa1g05618 423 MobiDBLite consensus disorder prediction 17 52 - -
Vifa1g05618 423 MobiDBLite consensus disorder prediction 255 340 - -
Vifa1g05618 423 MobiDBLite consensus disorder prediction 21 50 - -
Vifa1g05618 423 Pfam Putative nuclear localisation signal 132 276 IPR032310 -
Vifa1g05618 423 Pfam Tify domain binding domain 381 415 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05618 Vifa-Chr1 869953753 869956322 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05618 - - psat:127119679 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g05618 1 869953753 869956322 Vifa1g05618 1 869953753 869956322 ECH