Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05537 ATGCGAGATATGGGAAGAGAAATCATTCGTGAGGAATCACCAAGGAGGCCTGAGGAACGTAGTAGGTTGTGGTTTCACGAGGATGTGGTTGACGTATTATCAAGACAAAATGGAAAAGAAGGTGTTTTGGGACTGGCTTTAAAGCTGTCTAGAGCTAATGCAAAATGTTTTAGTACTAAAGCATTTGAGAAGATGGAGAGACTCAGACTCCTTCAACTTGATGAGGTAAAACTTGATGGAGATTTTGAATATGTTTCTAGAGATCTGAGATGGCTGTCATGGAATGGATTAAGTCAAATTCCTATAAACTTCTATCGAAAAAATTTAGTTTCCATCGAGTTAAAGAACAGCAATCTTGAACTTCTAGGGAATAAGACTCTGGTATGTGTTTTAATTTTTGTTTTTCATACTTCATGA 417 0.3693 MRDMGREIIREESPRRPEERSRLWFHEDVVDVLSRQNGKEGVLGLALKLSRANAKCFSTKAFEKMERLRLLQLDEVKLDGDFEYVSRDLRWLSWNGLSQIPINFYRKNLVSIELKNSNLELLGNKTLVCVLIFVFHTS 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05537 138 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 122 IPR044974 GO:0006952
Vifa1g05537 138 SUPERFAMILY L domain-like 47 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05537 Vifa-Chr1 859036470 859037147 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g05537 1 130 WRKY Transcription Factor Family AT4G12020 33.099 2.49e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05537 - - psat:127121188 195.282