Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05522 ATGCTTGTTGAGCAAAGCTTGGTAACGGTTGATGATAAGAACAAGCTTGGAATGCATGAATTGTTACGAGATATGGGAAGAGAAATCATTCGTGAAAAATCACCAAAAGAGCCTGAGGAGCGTAGCAGGTTATGGCTTCATGAGGATGTGCTTGATGTTTTATCGGATCAAAATGGAACAAAAGCTATTGAAGGGCTAGCTTTGAAGTTGCCAATAGCTAGTTCAAAATGTTTTAGCACTAAAGCATTTAAGAAGATGAAGAGACTCAGATTGCTTCAACTTGCTGGAGTAAAACTTGATGGAGATTTCAGATATCTTTCAAGAAATTTAAGGTGGTTATATTGGAATGGATTTCCTTTAACATGCATACCTTCAGATTTTTATCAAGGAAATATAATTTCCATGGAGTTAGAAAACAGCAATATGAGATTTGTGTGGAAAGAGACCCATAGAATGAAGATGCTGGAAATCCTAAACCTTAGTCATTCTCATCATCTGATGCAGACCCCAGATTTCTCTCATTTACCTAATCTTGAAAAGCTAGTTCTTGTAGATTGTCCAATGTTATCTGAGGTTTCCAACAATATTGGAGATCTCAATAAAATTCTTCTAATAAATTTGGAAGATAACTGTACTAATAAAACTAAAATTGTTGAGTAA 660 0.35 MLVEQSLVTVDDKNKLGMHELLRDMGREIIREKSPKEPEERSRLWLHEDVLDVLSDQNGTKAIEGLALKLPIASSKCFSTKAFKKMKRLRLLQLAGVKLDGDFRYLSRNLRWLYWNGFPLTCIPSDFYQGNIISMELENSNMRFVWKETHRMKMLEILNLSHSHHLMQTPDFSHLPNLEKLVLVDCPMLSEVSNNIGDLNKILLINLEDNCTNKTKIVE 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05522 219 Gene3D Ribonuclease Inhibitor 33 218 IPR032675 -
Vifa1g05522 219 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 209 IPR044974 GO:0006952
Vifa1g05522 219 SUPERFAMILY L domain-like 68 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05522 Vifa-Chr1 857335326 857336189 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g05522 2 208 WRKY Transcription Factor Family AT4G12020 31.839 2.72e-24 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05522 - - tpra:123910008 340.502