Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05513 ATGAAACATTATGGACCAAATAATAAAAGTCTCAAGGTTTGGGAATTTCCTGGTAGGTTGAAAGATGATGCAGTTAAAAGTTTATTTGAATTGTCACCTTCAAATATTCAAAAGCTTAAGAACCATGCAAAAAATGAGATGAAAATGAATGTTATCAATTTGTCAACATTTTCAGTTACATGTGCTTATGTGATATCAAGTTTAGCGAAAGCAGAAAAACCAAAGGATGAAAAAGTGGGTCTCATATTTAGTGTGGACTGTAGAACAAGATTGGAACATTCAATTTCTTCTATGTATTTTGGAAATTGTATTGCAGTACAAATGATTGAGCTTGAGACAAAGAAGTTAATTGAAAAAGATGGATTTTTAAGTGCCTTAGAAGGGATCGATGAAGGTTTGAATAAGGTGAAAAATGGAGTGTTAGATGGAGCTGAAAATTGGCTGCAGGTTATTTTAAACCCTAAAGAGAGTTTTAAACTATATTCTACTGCTGGATCACCAAGGTTTGATGTTTATGATATTGATTTTGGATTTGGAAAGCCAAAGAAAGTTGATATGGCTTCAACTGATAAAACAGGTGCATTTTCTCTTAGTGAGAGTAAGAATCACAATGGAGGAATTGAGATTGGTTTTGCTTTGGACAAGCATGAGATGGAAGCTTTTTCAACCCTTTTTGTTCAAGGTCTTGAATCCATTTAA 699 0.3319 MKHYGPNNKSLKVWEFPGRLKDDAVKSLFELSPSNIQKLKNHAKNEMKMNVINLSTFSVTCAYVISSLAKAEKPKDEKVGLIFSVDCRTRLEHSISSMYFGNCIAVQMIELETKKLIEKDGFLSALEGIDEGLNKVKNGVLDGAENWLQVILNPKESFKLYSTAGSPRFDVYDIDFGFGKPKKVDMASTDKTGAFSLSESKNHNGGIEIGFALDKHEMEAFSTLFVQGLESI 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05513 232 PANTHER - 16 231 - -
Vifa1g05513 232 Gene3D - 20 232 IPR023213 -
Vifa1g05513 232 Pfam Transferase family 28 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05513 Vifa-Chr1 855335043 855335741 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g05513 27 221 Monolignol Biosynthesis Gene Families AT5G48930 24.510 1.86e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05513 - - cam:101513090 316.62