Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05512 ATGAAATCATGGTCTTATATTACATGTTCTAACCCTAACCTCGAAAATGTAACACCTTGTTTTGATAGGTCAGTGATAGAAGATCATTATAGTGGAATCAGTGAAGCATATGTTGATGCTTTGATGAAACATTATGGACCAAATAATAAAAGTCTCAAGGTTTGGGAATTTCCTGGTAGGTTGAAAGATGATGCAGTTAAAAGTTTATTTGAATTGTCACCTTCAAATATTCAAAAGCTTAAGAACCATGCAAAAAATGAGATGAAAATGAATGTTATCAATTTGTCAACATTTTCAGTTACATGTGCTTATGTGATATCAAGTTTAACAAAAGCAGAAAAACCAAAGGATGAAAAAGTGAGTTTCATATTTAGTGTGGATTGTAGAACAAGATTGGGACATTCAATTTCTTCTATGTATTTTGGTAATTGTCTTGTAGGACATATTATTAAGCTTGAGACAAAGAAGTTAATAGGAAAAGATGGATTTTTAAGTGCTTTAGAAGGGATTAATGAAGGTTTGAATAAGGTGAAAAATGGAGTGTTAGATGGAGCTGAAAATTGGTTGCATAATATGTTAAACCCTAAGGAGAGTTATAAACTATATTCTACTGCTGGATCACCAAGGTTTGATGTTTATGATATTGATTTTGGATTTGGAAAGCCAAAGAAAGTTGATATGAGTAAGAATCACAATGGTGGAATTGAGATTGGTTTGGCTTTGAACAAGCATGAGATGGAAGCCTTTTCAACCCTTTTTGTGCAAGGGCTTCAGGCCATTCAAAGCTTCAAATTTTAG 798 0.3271 MKSWSYITCSNPNLENVTPCFDRSVIEDHYSGISEAYVDALMKHYGPNNKSLKVWEFPGRLKDDAVKSLFELSPSNIQKLKNHAKNEMKMNVINLSTFSVTCAYVISSLTKAEKPKDEKVSFIFSVDCRTRLGHSISSMYFGNCLVGHIIKLETKKLIGKDGFLSALEGINEGLNKVKNGVLDGAENWLHNMLNPKESYKLYSTAGSPRFDVYDIDFGFGKPKKVDMSKNHNGGIEIGLALNKHEMEAFSTLFVQGLQAIQSFKF 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05512 265 Gene3D - 62 260 IPR023213 -
Vifa1g05512 265 PANTHER - 1 258 - -
Vifa1g05512 265 Pfam Transferase family 1 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05512 Vifa-Chr1 855223712 855224509 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g05512 68 249 Monolignol Biosynthesis Gene Families AT5G48930 23.529 2.62e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05512 - - cam:101513090 316.62