Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05444 ATGGATTCAGATTTGAAGTGTTTAGTGATCATACGAGCTTGCGGTATTTATTTGATAAGAAGGATTTTGATTGCTTTTGAAGCTGCCATTAATGACCGTGTTGATGTGCTTTCTCTGTCTTTGGGAGGTTCTCCGGTGGAATATTATGAAAATAGTATGTCTATAGGTTCCTTTCATGCAGTTGCCAACAATATAATTGTAGTGAGTTCAGCTTCAAATGATCGACCTTATACTTGTTCTGTGGGAAATGTGGAACCATGGATGATCAATGTTGCGGCTAGTACAATTGATGGAGACCTCACTAGTTTTGTTAGCCTTGGTGACAACAAAACAATCAAGGGTGATAGCCTTTCAGGGATGGAATTGTTGCCTCGGAAACTGTATCCATTGATAAGTGGCGATCATGCTAAATATGATAATGTGTCTTCCAATGACGCCCTTAATTGCATTGGTGGAACCCTTGATCCACAAAAGTCCAAGGGGGAAATATTGGTTTGTCTTCAAGTTCAAGATGATTGTCACTTTCTTTGTAGAACTCACAAGGTTGTGGAAGCTGCCCGTGTGGATGGCAGTTACATTTTTAATTACATTAACCATACCAAGTCTCCTGTAGCTTACATTTATAAAGTGACGCCTGATATCATGACACCAGGAGTCAACATAATTGCGGCTTATAGCGAAGCTAGATCTCCCTCAAAATAA 702 0.3974 MDSDLKCLVIIRACGIYLIRRILIAFEAAINDRVDVLSLSLGGSPVEYYENSMSIGSFHAVANNIIVVSSASNDRPYTCSVGNVEPWMINVAASTIDGDLTSFVSLGDNKTIKGDSLSGMELLPRKLYPLISGDHAKYDNVSSNDALNCIGGTLDPQKSKGEILVCLQVQDDCHFLCRTHKVVEAARVDGSYIFNYINHTKSPVAYIYKVTPDIMTPGVNIIAAYSEARSPSK 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05444 233 ProSiteProfiles Serine proteases, subtilase domain profile. 1 233 - -
Vifa1g05444 233 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 196 IPR045051 -
Vifa1g05444 233 Pfam Subtilase family 25 110 IPR000209 GO:0006508|GO:0008236
Vifa1g05444 233 CDD PA_subtilisin_like 104 207 - -
Vifa1g05444 233 Gene3D - 97 172 - -
Vifa1g05444 233 SUPERFAMILY Subtilisin-like 21 226 IPR036852 GO:0004252|GO:0006508
Vifa1g05444 233 Gene3D Peptidase S8/S53 domain 21 96 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05444 Vifa-Chr1 845279833 845284450 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g05444 22 232 Subtilisin-like Serine Gene Family AT2G04160 36.296 4.79e-43 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05444 - - mtr:11408228 201.06