Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05442 ATGACAATTGGAACTAAGAAGAACAAGGAAGCTGTTGATGAGAATGCGCCTTTGGTACCGAACTCGGAAACAGATGGTGAGGTACATGAATTTAATGGAGCTTCATTTTCTGGGGCTGTTTTCAATTTGTCAACCACAATTATTGGTGCTGGAATCATGGGCTTGCCTGCTTGTGTTAAGAAATTGGGAATGGTACCGGGTCTTGTTGCCATAGTCCTAACGGCGTTTTTGACGGAGAGGTCAATTGAGTTCATTATCAGGTTTTCAAGGGCGGGGAATCTTTCTGCCTATGGAAGTCTTATGGGGGATGCCTTCGGGAAATATGGAAAACCTTTGGTGGAGATATGTGTTGTTATCAATAACGTTGGTATTTTGATTGTTTACATGATTATTATCGGTGATGTGATTTCTGGAACAACTTCAAGTGGTATTCACCATTCTGGTATCCTTGAAGGATGGTTTGGTGTCCATTGGTGGACTGGGCGTGCATTTGTTCTTGTTTTTACAACACTTTTTGTGTTTGCACCTTTGGTTAGCTTTAAGCGAATTGATTCGTTGAGATTCACATCTGCATTATCAGTTGGATTAGCTATTGTTTTCCTTATCATTGCCGTGGGGATCTCAATTATCAAGATTATTAGTGATGGCATAGGAATGCCCAGACTCTTCCCGGTCATTACTGATGCAGCTTCAGTTCTTGATCTATTCACTGTAGTTCCTGTGCTGGTGACCGCTTACATCTGTCACTACAACGTTCAAATCATAGATAATGAACTGGAAGATTCCTCATGGATGCAGGGGGTTGTACGTACTTCCCTTACTCTATGCTGCTCAGTGTACTCACTCACAAGCTTCTTCGGATTCCTCCTATTTGGTGACAATACTCTTGACGACGTGCTTGCCAATTTTGATACTAATCTTGGAATTCCTTTCGGTTCGGCGCTCAATGACGCTGTTCGTTTTAGCTATGCTGCGCATCTTGTGCTTGTATTTCCTGTAGTTTTCTATGGATTAAGGGTCAACATAGATGGTCTGATATTTACCTCATCAAGAAGGCCTTTGGTTGCCGATAACTTCAGATTTGCATCAATTACTTTTTCCCTTGTTGGCATTATCTTCCTGGGAGCAAACTTCATACCAAGCATTTGGGATATTTTCCAGTTCACTGGAGCAACCGCTTCCGTTTGTCTAGCATTCATATTTCCCGCTGCAATCACTCTGAGGGATCGATACAACATAGCAACTAAAACGGACAAAATACTATCTGTTTTTATGATAGTCCTGGCAGTCTTGTCAAACGCTGTTGCTATATATAGTGATGCCTATGCTTTGATCAACAAGAACAAAAATGTGAGTGATTTTTTAATTTGA 1371 0.4121 MTIGTKKNKEAVDENAPLVPNSETDGEVHEFNGASFSGAVFNLSTTIIGAGIMGLPACVKKLGMVPGLVAIVLTAFLTERSIEFIIRFSRAGNLSAYGSLMGDAFGKYGKPLVEICVVINNVGILIVYMIIIGDVISGTTSSGIHHSGILEGWFGVHWWTGRAFVLVFTTLFVFAPLVSFKRIDSLRFTSALSVGLAIVFLIIAVGISIIKIISDGIGMPRLFPVITDAASVLDLFTVVPVLVTAYICHYNVQIIDNELEDSSWMQGVVRTSLTLCCSVYSLTSFFGFLLFGDNTLDDVLANFDTNLGIPFGSALNDAVRFSYAAHLVLVFPVVFYGLRVNIDGLIFTSSRRPLVADNFRFASITFSLVGIIFLGANFIPSIWDIFQFTGATASVCLAFIFPAAITLRDRYNIATKTDKILSVFMIVLAVLSNAVAIYSDAYALINKNKNVSDFLI 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05442 456 Pfam Transmembrane amino acid transporter protein 34 438 IPR013057 -
Vifa1g05442 456 PANTHER AMINO ACID TRANSPORTER 29 432 - -
Vifa1g05442 456 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05442 Vifa-Chr1 844962773 844965319 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g05442 13 448 Amino Acid or Auxin Permease AAAP Family AT3G30390 67.506 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05442 K14207 - gmx:100791286 705.286