Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05433 ATGGAGAGCAAAGGATTGAGGCAATGGTTAAAGTTAAACCTTGTTGTGATTGTTTTGTTATTTATGAAGGCAGAAGCTGGTTATGCACCTATCACTATTCTCCAGAATGCAGTTGCAAAAGGAGCAGTATGTTTGGATGGTAGTCCACCAGCTTACCATTTAGTCAAAGGTTATGGAACAGGAATTAACAGTTGGTTAGTTCATATGGAGGGAGGGGGATGGTGCAACGATGTCACTTCATGCCTTGCTAGAAAGACTACTCGTTTAGGTTCATCTAAAGAAATGGTTACTAGTCTTCCATTTTCAGGAATCTTAAATGACAAGCAAGAGTTTAATCCAGATTTTTACAATTGGAACAGAATTAAGGTTAGATATTGTGATGGTTCATCTTTTACTGGCGATGTGGAAGAAGTCGATCCAAAAACTCAGTTACACTATAGAGGAGCAAGAATTTTCGATGCTGTCATGGACGATTTGCTAGCAGAAGGAATGAAGAATGCTCAAAATGCAGTTTTCTCAGGATGTTCAGCCGGAGGATTAACTGCATTACTGCATTGTGATAAATTTCGAGCTCTTTTATCAAAAGAAGCTAAAGTGAAATGTCTTCCCGATGCTGGTTACTTCATACATGCAAAAGATTTATCCGGAGAACCGCATGTTGAAGACTACTTCAATCAAATTGTTACCACACATGGTTCTGCAAAGAATTTGCCGAAATCATGCACTTCAAAACTTAAACCAGAACTGTGCTTTTTCCCTCAATATTTTGCATCAGAAATCACTACACCAATCTTCGTTTTAAATTCGCCTATCGACTCATGGCAGATTAAGAACATTTTTGCGACGAGTAATGCTGATCCTAAAAGAAACTGGCAAAACTGCAGGGAAGACTTAAACCAATGCACTCCTGATCAACTAAATCGAGTGCAAGACTATAGGGCCGAATTCCTAAAAGCACTGTCTGTTGTAGGAGACTCTCCATCCAACGGAGAGTTTATAGACTCTTGCTATCTCCACTGCCAAACTGAATTGCAGCAATTATGGCAATGGAGTGATTCTCCATCGTTGGCCAATACAACCATTGCAAAGGCTGTAGCAGACTGGTTTCATGACAGGAAGCCTTTCCAACAGATAGATTGTCCTTACCCTTGCAATCCAACTTGTCACAACCGCACTTCTGAACCTCCTAAAAGCAGTCCAACATTATAG 1209 0.4012 MESKGLRQWLKLNLVVIVLLFMKAEAGYAPITILQNAVAKGAVCLDGSPPAYHLVKGYGTGINSWLVHMEGGGWCNDVTSCLARKTTRLGSSKEMVTSLPFSGILNDKQEFNPDFYNWNRIKVRYCDGSSFTGDVEEVDPKTQLHYRGARIFDAVMDDLLAEGMKNAQNAVFSGCSAGGLTALLHCDKFRALLSKEAKVKCLPDAGYFIHAKDLSGEPHVEDYFNQIVTTHGSAKNLPKSCTSKLKPELCFFPQYFASEITTPIFVLNSPIDSWQIKNIFATSNADPKRNWQNCREDLNQCTPDQLNRVQDYRAEFLKALSVVGDSPSNGEFIDSCYLHCQTELQQLWQWSDSPSLANTTIAKAVADWFHDRKPFQQIDCPYPCNPTCHNRTSEPPKSSPTL 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05433 402 Pfam Pectinacetylesterase 23 374 IPR004963 GO:0016787
Vifa1g05433 402 PANTHER NOTUM-RELATED 17 390 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05433 Vifa-Chr1 844022280 844026486 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g05433 6 400 Carbohydrate Esterase AT4G19420 56.977 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05433 K19882 - gmx:100818146 601.282