Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05412 ATGGATGTAGCTGCCGGTGGCGGTTTCAAAACCGTTACTTCTCCCGTTCCTTATCTCTTTAGTGGCATAGCTCTCATGTTAGCAATTGCAACAGTTGCATTAATTATTCTAGCTTGTTCTTGTCATGGAAACTCATCGTCTACCACTTTAACAAATGAAGAGAAATCTATGAAGAATGTGGAAATTGTGGTGGATTTAGAGCCTAAGATTGTTGTCATTATGGCCGGAGAAACTAACCCTACATACTTGGCTAAACCTGTTTCATCAACATGTCACACTGAAGAAATGGTTTAG 294 0.398 MDVAAGGGFKTVTSPVPYLFSGIALMLAIATVALIILACSCHGNSSSTTLTNEEKSMKNVEIVVDLEPKIVVIMAGETNPTYLAKPVSSTCHTEEMV 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05412 97 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 11 91 IPR040359 GO:0080143
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05412 Vifa-Chr1 840554653 840554946 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g05412 14 97 Glutamine Dumper (GDU) Family AT2G24762 40.860 2.15e-15 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05412 - - gmx:102659552 92.8189