Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05369 ATGGTGGCCATAGTTTCGCAGAGGTCTTCTATCACATTGAGGGATGGGGTCGTTTTTATATGCGGCTACTCGAGTGGAGATCAGAGTATGTTCACAGAGAAAATTTATCTGCTCGTCGCCTCGCGGGGAGACGAAAGTTCTCAGGATGTTCACTTTGTGAACCACATGAACTTTATTGGTGGTGCTTTGACATTTTATGTAAAGGGCATATCTCTTCGATTTCCTCGTCTAGTTAGAGTATGTACTGCTAACAAAGTCCCAGATCAAGCCTCATCGTCTAAGCAGGTTGCTGAAATGTATAAAGCTCAAGTACAAACAATAATCACACGGACAATCCAAGATGATGAATAA 351 0.4245 MVAIVSQRSSITLRDGVVFICGYSSGDQSMFTEKIYLLVASRGDESSQDVHFVNHMNFIGGALTFYVKGISLRFPRLVRVCTANKVPDQASSSKQVAEMYKAQVQTIITRTIQDDE 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05369 116 Gene3D - 18 114 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05369 Vifa-Chr1 832509169 832511579 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g05369 68 103 Core DNA Replication Machinery Family AT1G49250 63.889 4.60e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05369 K10747 - dcr:108223221 56.225