Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05348 ATGGTATCTCCCAACAACCACCGTGAACATCTCCGGAGACTCGCCGGAAAAAACAACCACCGCCCTCGCCCTGCTCGCCAACGATCCTTCACCGGAGATATTGAACACGTCGCCGCAGAAACTTACTTAATCACTCACCTCGCCTTCACGCTTCTTCGCTATCTCGGGGTTGGTTACCGTTGGATTACGAAATTACTAGCACTTGGATGTTATGCCATGCTACTTATGCCCGGTTTTCTACAAGTTGCATATTACTATTTCTTCTCAAGCAAGGTAAAGCGAAGCATTGTTTATGGAGATCAACCTAGAAACAGGTTGGATCTGTATCTACCTGCTGATGTCAGTGAACCTAAGCCAGTTTTGATCTTTGTAACCGGGGGAGCATGGATTATTGGGTATAAAGCATGGGGCTCCCTTTTAGGACTACAGTTGGCAGAAAGAGACATTATAGTGGCATGCACTGATTACAGAAATTTTCCTCAAGGAACCATCAGTGACATGGTAAATGATACTTGTCAGGGAATTTCCTTTGTCATTAACAACATAGCTAGTTATGGAGGTGACCCTAATAGGATTTACCTTATGGGACAATCTGCTGGTGCACATATTTCGTCTTGTGCTTTACTGGAACAAGCAGCCATAGAATCTGGAAATCGAGACAGTGTTTCTTGGAGTGTATCCCAGATAAAAGCTTATTTTGGTTTATCAGGAGGGTACAACTTATTGGATTTAGTTGATCACTTTCACAATCGTGGATTGTACCGTTCCATCTTTTTAAGTATAATGGAAGCCGAACAATCTTTGAAGAAATTTTCTCCTGAAATCAAAATTCAAGACCCTTGCATCAAAGATTCCATTCCTCTCTTGCCCCCTATGTTTCTTTTCCATGGAACCGGCGATTATTCCATACCATCAATTGCCAGTGAACGGTTTGCTGATGCTCTTACGAAGGCAGGGGCAAGAGCTGAGCTGACTCTATATGATGGAAAAACACATACAGATTTGTTTCTTCAAGATCCACTCCGAGGTGGTAAAGAGGACCTATTTGAACATGTAGTTTCTATAGTACATGCCGATGATAGTGATGCTCTTGCAAAGGACGCCACGGCACCGCCAAGAAAACGGCTTGTTCCTGAGATTTTATTAAAGTTAGCTCACAATATCAGTCCCTTCTAA 1176 0.4294 MVSPNNHREHLRRLAGKNNHRPRPARQRSFTGDIEHVAAETYLITHLAFTLLRYLGVGYRWITKLLALGCYAMLLMPGFLQVAYYYFFSSKVKRSIVYGDQPRNRLDLYLPADVSEPKPVLIFVTGGAWIIGYKAWGSLLGLQLAERDIIVACTDYRNFPQGTISDMVNDTCQGISFVINNIASYGGDPNRIYLMGQSAGAHISSCALLEQAAIESGNRDSVSWSVSQIKAYFGLSGGYNLLDLVDHFHNRGLYRSIFLSIMEAEQSLKKFSPEIKIQDPCIKDSIPLLPPMFLFHGTGDYSIPSIASERFADALTKAGARAELTLYDGKTHTDLFLQDPLRGGKEDLFEHVVSIVHADDSDALAKDATAPPRKRLVPEILLKLAHNISPF 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05348 391 SUPERFAMILY alpha/beta-Hydrolases 84 354 IPR029058 -
Vifa1g05348 391 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 86 341 - -
Vifa1g05348 391 Pfam BD-FAE 106 315 - -
Vifa1g05348 391 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 88 340 - -
Vifa1g05348 391 MobiDBLite consensus disorder prediction 1 27 - -
Vifa1g05348 391 Gene3D alpha/beta hydrolase 87 340 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05348 Vifa-Chr1 831368830 831377853 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g05348 26 391 Carbohydrate Esterase AT1G26120 68.852 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05348 K15889 - gmx:100788814 645.966