Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05329 ATGGCGACTCCACCTGTGGTCAGATTTCCGATCTTCGCAACGGTTAGAGCGATTGGAGTTCTCATCATTCTGTTACTCCTAACCTGGGTTATTCATTTCAGGGGAGGTCTTGCTCTCTTTTCCGATAACAAAGATCTCATCTTCAATGTTCATCCGGTGTTGATGGTGATTGGGCTTGTTCTAATCAATGGCGAAGGCATGCTTGCATACAAGACAGTATCTGGAACTAAAAGCTTCAAAAAAACAGTTCATCTGGCATTACAGTTTCTCGCTCTCATTTTGAGCATAATCGGTCTCTGGGCTGCTTGGAAGTTTCACAATGACAAGGGCATTGACAATTTCTACAGCCTGCATTCATGGTTAGGCCTTGCATGCCTTTTCCTCTTCTTCATCCAGTTGGCTGCTGGATTTGCAACATTTTGGTATCCAGGAGGGTCAAGAAACAGTAGAGTTGCACTAATGCCATGGCATGTATTCTTTGGTACCTATATCTATGCTTTGGCTATAGCTACAACAACTACAGGCGTTTTGATTGTTGCTTTAGGCGGCTTTGTTATTCTTGGTCTCGTTACACCGACTTTTAATAAAGCTGATGTTATAAGAGGAAATGAATGA 615 0.426 MATPPVVRFPIFATVRAIGVLIILLLLTWVIHFRGGLALFSDNKDLIFNVHPVLMVIGLVLINGEGMLAYKTVSGTKSFKKTVHLALQFLALILSIIGLWAAWKFHNDKGIDNFYSLHSWLGLACLFLFFIQLAAGFATFWYPGGSRNSRVALMPWHVFFGTYIYALAIATTTTGVLIVALGGFVILGLVTPTFNKADVIRGNE 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05329 204 ProSiteProfiles Cytochrome b561 domain profile. 14 204 IPR006593 -
Vifa1g05329 204 Gene3D - 1 202 - -
Vifa1g05329 204 PANTHER CYTOCHROME B561-RELATED 6 177 IPR043205 GO:0016491
Vifa1g05329 204 FunFam Cytochrome b reductase 1 5 180 - -
Vifa1g05329 204 Pfam Eukaryotic cytochrome b561 50 176 IPR006593 -
Vifa1g05329 204 SMART 561_7 50 176 IPR006593 -
Vifa1g05329 204 SUPERFAMILY Transmembrane di-heme cytochromes 78 191 IPR016174 GO:0016020|GO:0022904
Vifa1g05329 204 CDD Cyt_b561_ACYB-1_like 41 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05329 Vifa-Chr1 828363522 828365830 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g05329 1 200 Chloroplast and Mitochondria Gene Families AT5G38630 61.842 9.27e-94 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05329 K08360 - gmx:100787570 328.946