Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05315 ATGGATCCTAATCATTTTCATTATCAACAAGCTATGTTCAATTACATGCAAAATAATCAAAATCCTAATTCTCAAAATGCTCAAATTCCATCGATGTCAACAAACCCCGCCATATTTTTTTTGTCACCAAACAATCCAAATATGTTTCCTAGCCCTCAAATGAATTCTAATAGTATGGAATTTTTTCGTCATGAACCGGAAATACCGATTGGATTTATGTCCGGTTGTCAACTTCCACCCTTTTCTACTCAATCATGGCTCAATGTTTCAAAGGATCCAATTGTGGGAGTTGATCAAAAGGCTGAGAGTTTTTGGGTAAGAGTCGCTGCCAATTATAACCAGTATCGTGGACAATCGCGGGAAAAGGTAGGGGGACAATTAAAATGTCGATGGCATCGAATAAATGGCATGGTTCAAAAATTTGTTAGGTGTTACAAACAAGATGTTAATGGAAAGAAAAGTGGGACATCGGAGAACGATATCATGGCCTATGCACATGCTTTTTTTGCTCAGGATCAAGGTACAACATTCAATCTTGAGTACACATGGCGACTGTTAAAAGATGAACCTAAATGGATGAGAGAATCGATTAGAAGTTCTTCAAAAATAACAAAGACTTCCGCTAGTGGGGCATCATCGGAGAACCCAGATACATATTCAAGTTATGAGTTTAACTCATCATCACCAATGGAGCGTCCAATGGGACAAAAAGCAGCAAAAAGGAAGGGTAAGACAAATAATATTCCAACTGCAACGGAAGATGCAAGGAATAAAAGAACAACAACAATGGAAAGACTAGCGCAATGTAAGGAGGACGAGATAGAAGTAAAGGTAATGCAAATTATGATGAAAGACACTTCTACTATGAGCGATAGTCAACGAGATATTCATGAAAAATATTGTAATAAGATGGAAAAAAAATGGAATGTAGTTAGTATCACTTATGTAAAATGGTCATTAGTACCACTTTAA 972 0.3673 MDPNHFHYQQAMFNYMQNNQNPNSQNAQIPSMSTNPAIFFLSPNNPNMFPSPQMNSNSMEFFRHEPEIPIGFMSGCQLPPFSTQSWLNVSKDPIVGVDQKAESFWVRVAANYNQYRGQSREKVGGQLKCRWHRINGMVQKFVRCYKQDVNGKKSGTSENDIMAYAHAFFAQDQGTTFNLEYTWRLLKDEPKWMRESIRSSSKITKTSASGASSENPDTYSSYEFNSSSPMERPMGQKAAKRKGKTNNIPTATEDARNKRTTTMERLAQCKEDEIEVKVMQIMMKDTSTMSDSQRDIHEKYCNKMEKKWNVVSITYVKWSLVPL 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05315 323 MobiDBLite consensus disorder prediction 199 232 - -
Vifa1g05315 323 Pfam No apical meristem-associated C-terminal domain 176 294 IPR029466 -
Vifa1g05315 323 MobiDBLite consensus disorder prediction 196 252 - -
Vifa1g05315 323 PANTHER - 84 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05315 Vifa-Chr1 826722187 826723243 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g05315 85 273 Glutathione S-transferase Gene Family AT5G41240 31.841 3.48e-21 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05315 - K19269 psat:127115199 420.624