Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05310 ATGCCACGTGAGCATAGGTTTTATTGTGATTGTATTGAGAAGTGGTTAGGGATTCATGGGTCTTGTCCTGTTTATAGGTATCAGATGCCTGCTGATGAGAAAGATGAGGGAAAGAAAATAGACGAAGAGGAAGAAGCAGAAGAAGGTGGAGAGAGAAGGAGGGTTGGTGGGGAAGTTTGGGTTAGTTTTTCTATTAGTAGGAGGAATAGGGGAAATCATGATCAAAATCAACCCACTTCTGGTGGTGATTCAAATGTTTCTCCATCAAGCCCTAGTGATGGTGATGAGATTGGGAATTGA 300 0.4233 MPREHRFYCDCIEKWLGIHGSCPVYRYQMPADEKDEGKKIDEEEEAEEGGERRRVGGEVWVSFSISRRNRGNHDQNQPTSGGDSNVSPSSPSDGDEIGN 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05310 99 MobiDBLite consensus disorder prediction 65 99 - -
Vifa1g05310 99 MobiDBLite consensus disorder prediction 30 99 - -
Vifa1g05310 99 SUPERFAMILY RING/U-box 4 29 - -
Vifa1g05310 99 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 55 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05310 Vifa-Chr1 826189510 826189809 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g05310 1 82 C3H Transcription Factor Family AT1G26800 45.238 5.08e-16 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05310 - - pcin:129321278 81.6481