Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05291 ATGATGGAGCTAGGGTTAGAGTATTCATGTATCCAAGCAATATATAAGGATTTTATCTGTGCATATATCAATGTGAAGAGAGGGTTAGGTCTATTGGCTACGGATAGTTTAATGTTTGAGGACAAGAGGACAAAGCCATTTGTGGAATTGTATGCGACAAATGAAAGCAAATTCTTTGAGGATTTTGGTCATGCTATGCGTAAGGTAAGTGTTTTGAATGTTAAGGTGGGGAAGAAGGGAGAGGTACGAAATAGGTGTGATTCTTTCAACAACCTTGATACTAATTGA 288 0.375 MMELGLEYSCIQAIYKDFICAYINVKRGLGLLATDSLMFEDKRTKPFVELYATNESKFFEDFGHAMRKVSVLNVKVGKKGEVRNRCDSFNNLDTN 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05291 95 Gene3D Peroxidase, domain 2 22 69 - -
Vifa1g05291 95 PANTHER - 22 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g05291 95 Gene3D - 70 90 - -
Vifa1g05291 95 ProSiteProfiles Plant heme peroxidase family profile. 22 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g05291 95 SUPERFAMILY Heme-dependent peroxidases 22 90 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05291 Vifa-Chr1 823829602 823832180 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g05291 22 93 Peroxidase AT5G47000 61.111 5.38e-26 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05291 K00430 - tpra:123896134 125.176