Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05249 ATGGGAAATGAAAATGTTCCTAATGTTGGACTTGATGAATTTCTTGATTTTTCTACACAAACGGCTCTTGGTGACATGAACGGTGGTCATGAAACCACTCCAAATGCAGAGGATTCAACTTTTGTTCACGGTGTTGTTGGGAGAAACCAAAAAAGTTATTCATATTGGGGTAAAATTGCTTATTACTGTAATGAGCATTGCTCATTTGATCATCCCCGTGATGGAGCTGCATGTAGAAATCATTACAACTACATGAACAAAATACTTAATAAATGGACAAGCGCTTATGATAACGCTAAGCGTATGCAAAAAAGTGGGTGGTCGGAGAATGATGTATTGGCAAAAGTGCATGAATTATATTCAAGTGGTAAGAGTGGACATTTCATTTTAATGTCAGAATGGCTCGCTCTTCGTGATCAACCACGTTATGGTAGTCAGGTAGGAGGAAATAGTGGATCTGTAGGTAGTGGATCTAAGAGAGCCCACAAGAGTGATGCAAGTCATTCTAACTCCGTAGAATCTAGTGTTCGCCCAATGGGGAGGCATGCAGCAAAAAAAAGGGTAAAAAAAAGTAATGGCGCAGCCTTGGAATCGGTCAATGAAGAGTGGAATGAATTCAAACAATTTAAGGAGAAAAAGTTGGAACGATTGGACAAAATAGCCATGAGGCAAGAGGAAGCTAACCAATTGTTGAAAGAAATTACCGAGGCTAAGAAGATGAAGATGTTTATGAAGCTAAGTTCAAATGAGCATCTTGATGACCGGAGCAAAGAGTTGTTGGAAAAGTTGGATTATGATCAATCTGAGGCAAGTGGGTCTGGTACACCGGAGCCATTCTCGACTGAGGTGCTACCTACATTTGCAAATCATGTGCGTGCTAGATCTGTGATGCGTGATTCAAATGTACATCATGAATTGCAAGCAGATCTAGTCAAACATATATGGATAAAGTTTGGAATATTTCGTGATTAA 972 0.3961 MGNENVPNVGLDEFLDFSTQTALGDMNGGHETTPNAEDSTFVHGVVGRNQKSYSYWGKIAYYCNEHCSFDHPRDGAACRNHYNYMNKILNKWTSAYDNAKRMQKSGWSENDVLAKVHELYSSGKSGHFILMSEWLALRDQPRYGSQVGGNSGSVGSGSKRAHKSDASHSNSVESSVRPMGRHAAKKRVKKSNGAALESVNEEWNEFKQFKEKKLERLDKIAMRQEEANQLLKEITEAKKMKMFMKLSSNEHLDDRSKELLEKLDYDQSEASGSGTPEPFSTEVLPTFANHVRARSVMRDSNVHHELQADLVKHIWIKFGIFRD 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05249 323 Coils Coil 207 240 - -
Vifa1g05249 323 PANTHER - 45 263 - -
Vifa1g05249 323 MobiDBLite consensus disorder prediction 145 192 - -
Vifa1g05249 323 MobiDBLite consensus disorder prediction 145 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05249 Vifa-Chr1 817841596 817843511 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g05249 45 190 Glutathione S-transferase Gene Family AT5G41240 25.309 1.62e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05249 - - bna:106403232 339.732