Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05129 ATGGCTTCTTTTACTTTCTCTTTGAATTCCACAACCCTACTTGTGCTTCTCTTGGCCTTTTTCTCTTGTCTACAATTTTCCCTTGTAGATTCTTATGAATTTCAAGTTGGTGACCTAAAAGGTTGGGTTGTTCCACCACCCAATGACACTGATATCTACAATATTTGGGCTTCTAACTTTAGATTCCAAGTTGGTGACTCCATAATTTTCAAGTACAAGAAGGATTCAGTGATGGAAGTTGGAAAACAAAACTACAATGATTGCAATGCAACACAACCAACATTTTTCTCAAACAATGGTGACACAGAATTCAAGTTTGGTCATTCAGGAACATTCTACTTCATAAGTGGTGCATCAGGACATTGTGAGAAAGGACAAAAAATGATTGTGAGAGTGATGATTCAAGATCTTCATTCAAAATCTTCTGCCTACCATGTTCCTGTTTTTCACATTGGTGTCTTTGTTTTTGCATTTGTTGCTTCCTATGTAATTTGA 495 0.3636 MASFTFSLNSTTLLVLLLAFFSCLQFSLVDSYEFQVGDLKGWVVPPPNDTDIYNIWASNFRFQVGDSIIFKYKKDSVMEVGKQNYNDCNATQPTFFSNNGDTEFKFGHSGTFYFISGASGHCEKGQKMIVRVMIQDLHSKSSAYHVPVFHIGVFVFAFVASYVI 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05129 164 ProSiteProfiles Phytocyanin domain profile. 32 134 IPR003245 GO:0009055
Vifa1g05129 164 Pfam Plastocyanin-like domain 51 126 IPR003245 GO:0009055
Vifa1g05129 164 SUPERFAMILY Cupredoxins 32 133 IPR008972 -
Vifa1g05129 164 Gene3D - 31 137 IPR008972 -
Vifa1g05129 164 CDD OsENODL1_like 32 133 IPR041846 -
Vifa1g05129 164 PANTHER BLUE COPPER PROTEIN 32 132 IPR039391 GO:0009055
Vifa1g05129 164 FunFam Early nodulin-like protein 1 31 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05129 Vifa-Chr1 799374236 799375093 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g05129 29 143 Phytocyanin Superfamily AT5G14345 59.130 2.43e-44 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05129 - - lang:109346935 202.216