Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05110 ATGCCGACGGTAGCCGTGAAACTCTACAGCGTGTTCTTCAAGTTTCTGTTAAAACACCGTTTACAAAATCGGATCCAAACTCCGACTGAAGAATCCGACTCGTTCGGTATAACTTCTCGACCCGACGAATCTTTAGCTTCACCTAATCCTTCCTTCACCGACGGCGTCGCCACCAAAGATATTCATATTGATTCGAATCTTTCTCTTTCGGTTCGAATCTTTCTCCCTGAATCTGCATTGTTAAATCCCGAACCTAATTCCAAACCTAAACGAAAATTAGAACCTAAGGGACGTGAAACGACGTCGTCGCCGAGGGTTAATACAAGGAGGAATAGTTATGGTCCGAGTGTTGCTCCGGTGAAGGAGGAGGTAAGAAGGAATAGTGTCGGCGGTGGTGATGCGGAGGGTTTGAATTTGAATTTGAATTTGACTTCCGGTGGTGGATATGGCGGTTACGGTGGTTATGGTGGTTATTCGCCGACGATTGATGATCGGAAGAGGAAGTTACCGGTGATGGTGCAGTTTCATGGAGGTGGTTGGGTGAGTGGGAGTAATGATTCGGTGGCGAATGATTATTTTTGTAGGAGGATTGCGAAGCTATGTGATGCGGTGGTTGTTGCGGTTGGGTATCGGCTTGCGCCGGAGAGTCGGTATCCGGCGGCTTTTGAGGATGGATTTAAGGTTTTGAGTTGGTTGGGGAAACAGGCGAATTTGGCGGAGTGTAGTAAGTCGTTGGGGATTAAGAAATTGGATGGTGGTCATAGGCATATTGTTGATTCTTTTGGGGCTTCTATGGTTGAACCTTGGTTGGCTGCACATGGAAATCTATCAAGGTGTGTGCTTCTTGGTGTGAGTTGTGGAGCAAATATTGCAAACTATGTAGCTCAAAAAGCTGTAGAAACAGGCAAACTTCTGGACCCTGTCAAAGTGGTGGCGCAGATCCTGATGTATCCGTTCTTTGTCGGAAGTGTGCCTACACATTCTGAAATAAAGTTGGCAAACTCTTATTTTTATGACAAAGCTATGTGTATGCTGGCATGGAAACTATTCCTACCCGAGAAAGAATTTAGCCTAGACCATCCAGCCGCCAATCCTCTAGTCCCAGGCCATGGTCCTCCTTTAAAGCAGATGCCTCCAACATTAACAGTAGTGGCAGAACATGACTGGATGAGAGATCGTGCCATAGCTTACTCAGAGGAGCTTAGGAAGGTGAATGTTGATGCGCCTGTTCTTGAATATAAAGACGCAGTTCATGAATTTGCTACACTAGACGTACTTCTAAGAAGCCCTCAAGCTCAGGTTTGTGCCGAGGACATTGCCATCTGGGTCAAGAAATACATTTCACTTCGAGGGCATGAGTTCTCATATTGA 1371 0.4602 MPTVAVKLYSVFFKFLLKHRLQNRIQTPTEESDSFGITSRPDESLASPNPSFTDGVATKDIHIDSNLSLSVRIFLPESALLNPEPNSKPKRKLEPKGRETTSSPRVNTRRNSYGPSVAPVKEEVRRNSVGGGDAEGLNLNLNLTSGGGYGGYGGYGGYSPTIDDRKRKLPVMVQFHGGGWVSGSNDSVANDYFCRRIAKLCDAVVVAVGYRLAPESRYPAAFEDGFKVLSWLGKQANLAECSKSLGIKKLDGGHRHIVDSFGASMVEPWLAAHGNLSRCVLLGVSCGANIANYVAQKAVETGKLLDPVKVVAQILMYPFFVGSVPTHSEIKLANSYFYDKAMCMLAWKLFLPEKEFSLDHPAANPLVPGHGPPLKQMPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDVLLRSPQAQVCAEDIAIWVKKYISLRGHEFSY 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05110 456 PANTHER ARYLACETAMIDE DEACETYLASE 40 421 - -
Vifa1g05110 456 MobiDBLite consensus disorder prediction 27 53 - -
Vifa1g05110 456 Gene3D alpha/beta hydrolase 26 450 IPR029058 -
Vifa1g05110 456 MobiDBLite consensus disorder prediction 80 117 - -
Vifa1g05110 456 SUPERFAMILY alpha/beta-Hydrolases 48 447 IPR029058 -
Vifa1g05110 456 Pfam alpha/beta hydrolase fold 172 421 IPR013094 GO:0016787
Vifa1g05110 456 MobiDBLite consensus disorder prediction 100 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05110 Vifa-Chr1 796778396 796781902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g05110 1 456 Carbohydrate Esterase AT3G27320 69.099 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05110 - - gmx:100794631 697.582