Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04971 ATGGCAGATTCAAGCTTAGAACGAGCGAAAAAGAAAGAAGTGATTCGAATTGAACGTGAATCCGTCATTCCAATTTTGAAACCTAGGCTCTTCATCTCATTGGCTAATCTTATTAAGCGTAGTTCTGATCGAGAAGAGTTTTTGAAGCTTTGCAAAAGAATTGAGTATACAATTAGAGCTTGGTATCTTCTACAATTTGAGGATATGATGCAACTGTATTCACTCTTTGATCCTGTCTCTGGTGCTCAAAAATTGGAACAACAAGGCTTAACTTCTAAGGAAATTGATGTACTTGAACAAAATTTCTTGACCTATCTTTTTGAGGTAATGAAAAAGAGCAACTTCAAGATTGCAACAGATGATGAAATTAATGTTGCACTTTCTGGACAGTATCTTCTAAATCTTCCAATCAGTGTTAATGAATCTAAGCTTGACAATAAGTTTTTGCGAAAATATTTTGAAGCACATTCCTATAACAACCTTCCAGATTTTCATGAAAAGTATATAATCTTTCGGCGGGGAACTGGACTTGATCAAACCACGGATTACTTTATATTAGAGAAAGTCGACATGCTTATTGCACGTTTTTGGGCATTTCTACTAAGAACACTCAGGTTGGAAAAACTAGTAGTGAGACATGGTAAGAAACTAGATCCAAAGAAGGACGACGAAATAAACTCGTCATCAAACGAAGCTCATCAAGAGGATGTATACGAACGGATACGCCTTGAAAATATGCCATTGAGTTCGGGTAGTTTGCTAAGCAAGACAACAATCCAAGAACCTACATTTGATAGGATCATTGTTGTTTACAGGCGGGCGAGTTCCAATTCAAAACCAGACAGAGGAATTTTCGTGAAGCATTTCAGAAACATCCCAATGGCCGATATGGAAATCGTTCTTCCAGAAAAGAAAAATCCTGGACTGACTCCTATGGATTGGGTGAAGTTTCTTGGATCTGCTATAGTTGGGTTGGTAGCTGTAGTTAGTTCACTTCAAACAGCTACAACCGATTTGAGGGTTATCGGGGCCGTTCTTTCTACCATTGTCGGTTATTGTGTTAAAACATACTTCACGTTCCAACAAAATTTGACTGCATATCAAGATATGATTACGCAGTCGATGTATGAAAAACAACTAGACAGTGGAAGAGGAACACTTCTCCATTTATGTGATGATGTCATTCAACAAGAAGTGAAAGAAGTAGTGATTTCATTCTTTATTCTGATGGAACAAGGAAAAGCTACAAGACAGGAACTGGATCAAGGGTGTGAAGAACTTATCAAAGAAGAATTCAATGAGAGTTGCAATTTTGATGTAGATGACGCGGTTCATAAACTTGAGAAGCTGGGCATTGTTACTCGGGATCCCATAGGACGATATCAATGTGTTGGATTGAAGAGGGCTAGCGAGATAATCGGTGCCACCACTGAAGAGATTGTAATTAAGGCAAAGCAAGGAAACATGTCTTCTTGA 1476 0.3814 MADSSLERAKKKEVIRIERESVIPILKPRLFISLANLIKRSSDREEFLKLCKRIEYTIRAWYLLQFEDMMQLYSLFDPVSGAQKLEQQGLTSKEIDVLEQNFLTYLFEVMKKSNFKIATDDEINVALSGQYLLNLPISVNESKLDNKFLRKYFEAHSYNNLPDFHEKYIIFRRGTGLDQTTDYFILEKVDMLIARFWAFLLRTLRLEKLVVRHGKKLDPKKDDEINSSSNEAHQEDVYERIRLENMPLSSGSLLSKTTIQEPTFDRIIVVYRRASSNSKPDRGIFVKHFRNIPMADMEIVLPEKKNPGLTPMDWVKFLGSAIVGLVAVVSSLQTATTDLRVIGAVLSTIVGYCVKTYFTFQQNLTAYQDMITQSMYEKQLDSGRGTLLHLCDDVIQQEVKEVVISFFILMEQGKATRQELDQGCEELIKEEFNESCNFDVDDAVHKLEKLGIVTRDPIGRYQCVGLKRASEIIGATTEEIVIKAKQGNMSS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04971 491 PANTHER AMINOPEPTIDASE (DUF3754) 9 489 - -
Vifa1g04971 491 Pfam Protein of unknown function (DUF3754) 264 385 IPR022227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04971 Vifa-Chr1 775769507 775773201 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04971 - - mtr:25495897 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g00450 5 99586647 99588701 Vifa1g04971 1 775769507 775773201 PCT