Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04957 ATGGATCATTCTCTCTTACCTCGCTTCCTCTACTCCTCTATGTCATTGCCGCAGAAGAAGATCGTGGAGGATATATCCACCTATCACCATGTTGCGACGGAAACCTCCAAGTTTATGATTCCTTCTCCTAGCGAAACTGGAAGAAGGAACATAAAGATGTTTTCTCGTGATTACTATCTTGCTTGCGCCGTTGGTGGAAGCATATGTTGTGGCTTCACTCACATGGCAGTAACACCTCTTGATCTTGTCAAATGTAACATGCAGATTGACCCTGCAAAGTACAAGAGCATTTCCTCTGGATTTGGGGTGATGCTAAAGGAACAAGGATTTAGAGGATTTTTCAGAGGATGGGCACCTACATTTCTTGGTTATAGTGCACAAGGTATTAAGGTTAGAGTTCAAACTCAACCCGGTTTTGCTAGAGGCCTTTCTGATGGCTTACCCAAATTGATCAGATCTGAAGGAGTTTCAGGGTTGTACAAGGGAGTTGTGCCACTTTGGGGAAGACAGGTTCCATATACGATGATGAAGTTTGCTTCTTATGAAAAGATTGTCGAGATGATCTACAAGCATGCCATCCCCACACCAAAGGAAGATTGCACCAAAACCCTACAACTTGGTGTGAGTGTTGTGGGTGGATATTTAGCTGGAATATTGTGTGCGGTTGTGTCTCATCCCGCGGATAATCTTGTATCTTTTCTAAATAGTTCTAAAGGAGCAACGGCTGCTGATGCTGTAAAGAAGTTGGGATTATGGGGCATGTGTACACGTGGTCTCCCTCTTCGTATTCTTATGGTGGGAACTCTAACCGGTGCTCAATGGGGAATTTATGATGCATTCAAAGTTTCTGTGGGACTGCCAACAACTGGTGGTCTTGCTCCTGCTCCGGCTTCTACTTCTTAG 903 0.4441 MDHSLLPRFLYSSMSLPQKKIVEDISTYHHVATETSKFMIPSPSETGRRNIKMFSRDYYLACAVGGSICCGFTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVMLKEQGFRGFFRGWAPTFLGYSAQGIKVRVQTQPGFARGLSDGLPKLIRSEGVSGLYKGVVPLWGRQVPYTMMKFASYEKIVEMIYKHAIPTPKEDCTKTLQLGVSVVGGYLAGILCAVVSHPADNLVSFLNSSKGATAADAVKKLGLWGMCTRGLPLRILMVGTLTGAQWGIYDAFKVSVGLPTTGGLAPAPASTS 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04957 300 Gene3D Mitochondrial carrier domain 128 285 IPR023395 -
Vifa1g04957 300 Gene3D Mitochondrial carrier domain 26 127 IPR023395 -
Vifa1g04957 300 Pfam Mitochondrial carrier protein 129 191 IPR018108 -
Vifa1g04957 300 Pfam Mitochondrial carrier protein 59 127 IPR018108 -
Vifa1g04957 300 SUPERFAMILY Mitochondrial carrier 58 279 IPR023395 -
Vifa1g04957 300 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 129 294 IPR044677 GO:0005315|GO:1990547
Vifa1g04957 300 ProSiteProfiles Solute carrier (Solcar) repeat profile. 57 187 IPR018108 -
Vifa1g04957 300 FunFam Phosphate carrier protein, mitochondrial 122 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04957 Vifa-Chr1 773219757 773221491 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04957 3 297 Chloroplast and Mitochondria Gene Families AT5G14040 57.300 1.35e-143 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04957 K15102 - gmx:547633 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01859 5 543896331 543899173 Vifa1g04957 1 773219757 773221491 PCT