Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04938 ATGGCCGAGGGAGTTAAAGAACGAACTTTGGAAGAAACACCAACTTGGGCTGTTGCAGTTGTGTGTCTTGTATTGCTTGCTGTCTCAATCTTGATTGAACATATTATTCATGTTATTGGAAAGTGGTTGAAGAAGAGAAACAAAAATGCTCTTTATGAAGCTTTGGAAAAGGTCAAAGGAGAGCTTATGCTACTAGGATTCATATCCTTGCTTCTAACTGTATTCCAAGATAATATTTCTGAAATATGCATATCACAAAAAATTGGATCAACTTGGCATCCTTGTTCCAATACTCCAAAGGCAAAGACTAAGACTAAATCTCATGAATCATTCAACTATGAAATCAATGATAGAAAACTCTTGGAGTATTTCGATCCTATACCTAGGAGAATTCTTGCTACAAAAGGATATGATAAATGTTTTGATAAGGGTCAAGTTGCTTTAGTTTCTGCATATGGAATTCACCAACTCCATATATTCATTTTTGTGCTGGCAATATTTCATATCCTTCAATGTATTATAACATTAACTTTGGGAAGAATCAAGATGAAGAAGTGGAAGACTTGGGAAGATGAGACAAGAACAGTTGAATATCAATTTGATAATGATCCCGAGAGGTTTAGGTTTGCAAGGGACACAACATTTGGAAGAAGGCACTTGAGCATGTGGACTCAGTCACCTATTTTATTATGGATTGTTAGCTTCTTCAGACAATTCTTTGGATCTATAAGTAGAGTTGATTATATGGCTCTTAGGCATGGATTTATCATGGCTCATCTTGCACCAGGACATGATGAACAATTTGATTTCCAAAAGTATATAAGTAGATCAATTGAAGAGGATTTTAAAGTTGTAGTAGGAATAAGTCCAACTATCTGGCTATTCACAGTGCTTTTCCTTCTTACTAATACTCATGGGTGGTATTCTTATTATTGGCTTCCATTTCTTCCGTTAGTCATAATCTTATTAGTTGGTGCTAAGTTACAAATGATCATAACAAAGATGGGATCAAGGATTCAAGACAGAGGAGGAGTAATCAAGGGTGCACTTTTGGTTGAGCCTGGAGATCACCTTTTCTGGTTCAATCGTCCTCACCTTCTTCTCTTTGCGATTCATCTTGTTCTCTTTCAGAATGCCTTTCAACTTGCATTTTTTGTTTGGAGTACATATGAGTTTTCCATAACATCTTGCTTCCACAAAACCACCGTAGATACTGTCCTTAGAATCACCCTAGGGATTGTAATCCAAATTCTTTGTAGCTACGCGACTTTGCCTCTTTATGCTTTAGTCACACAGATGGGAACAAGCATGAAACCAAGCATTTTCAACGAAAGAGTGGCAACAGCACTTAAGAAGTGGCATCACACAGCGAAAAAGCAGGTAAAACAGAGCAAGCATTCAAACAACACAACGCCAAACTCTAGCCGGCCATCAACCCCAACACATGCCATGTCTCCTGTTTATCTGCTCCATAGACACACTTCTGGAAACAGTGACAGTCTACAAACTTCTCCGAAGAGGTCTAACTACAAAAACGAACAATGGGATTTTGAAGGAGAAGGATCAACTTCCCTAAGAAACGATCAAATAGGGCCGAGTGAGATTCAAATAGCGGGTATCGAGTCATTTTCAACAACCGAATTGCCCGTTAGAGTTAGACAGGAAATCACCTCTGGTTCAAAAGATTTTTCTTTCGAGAAGCGACAATTAGGGAGGGATTAG 1722 0.3821 MAEGVKERTLEETPTWAVAVVCLVLLAVSILIEHIIHVIGKWLKKRNKNALYEALEKVKGELMLLGFISLLLTVFQDNISEICISQKIGSTWHPCSNTPKAKTKTKSHESFNYEINDRKLLEYFDPIPRRILATKGYDKCFDKGQVALVSAYGIHQLHIFIFVLAIFHILQCIITLTLGRIKMKKWKTWEDETRTVEYQFDNDPERFRFARDTTFGRRHLSMWTQSPILLWIVSFFRQFFGSISRVDYMALRHGFIMAHLAPGHDEQFDFQKYISRSIEEDFKVVVGISPTIWLFTVLFLLTNTHGWYSYYWLPFLPLVIILLVGAKLQMIITKMGSRIQDRGGVIKGALLVEPGDHLFWFNRPHLLLFAIHLVLFQNAFQLAFFVWSTYEFSITSCFHKTTVDTVLRITLGIVIQILCSYATLPLYALVTQMGTSMKPSIFNERVATALKKWHHTAKKQVKQSKHSNNTTPNSSRPSTPTHAMSPVYLLHRHTSGNSDSLQTSPKRSNYKNEQWDFEGEGSTSLRNDQIGPSEIQIAGIESFSTTELPVRVRQEITSGSKDFSFEKRQLGRD 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04938 573 Pfam Mlo family 7 493 IPR004326 GO:0006952|GO:0016020
Vifa1g04938 573 PANTHER MLO-LIKE PROTEIN 1 6 511 IPR004326 GO:0006952|GO:0016020
Vifa1g04938 573 MobiDBLite consensus disorder prediction 458 483 - -
Vifa1g04938 573 MobiDBLite consensus disorder prediction 463 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04938 Vifa-Chr1 770224399 770228757 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04938 4 567 MLO family AT2G39200 62.093 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04938 K08472 - gmx:100817285 821.617