Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04903 ATGGAGGTAAAATCTCCCACCACCAACAACAACAATAATGGTAAAGGGTCCTCTTTTGAAGTGGATGGTGTTCAGCCCACCCCGAGCCCAATCTGTAAAATGATCGCCGTAGCGTCTATCGCTGCTGGCGTTCAGTTCGGATGGGCTCTTCAGCTCTCCCTATTGACACCATACTCGCAAACTCTCGGAGTTCCGCATGCATGGTCCTCCTTCATCTGGCTCTGTGGCCCTATCTCTGGACTTTTAGTCCAGCCTATAGTAGGTTATTATAGTGACCGAAGCACTTCCCGCTTCGGTCGCAGACGTCCCTTCATTTTAAGTGGAGCCTTAGCCGTGGCTGTTTCTGTTTTCCTCATCGGTTACGCAGCTGACCTTGGCCACTCCATGGGCGACGACTTGTCTAAAGTAACCCGACCAAGGGCCGTCACTATCTTCGTCATTGGCTTCTGGATCCTCGACGTTGCCAACAACATGCTCCAGGGACCGTGTCGCGCATTCCTCGCGGACCTTGCAGCCGGGGACGAGAAGAAGACAAGAACAGCAATGAGTTTCTTCTCTTTCTTCATGGCCGTCGGTAGTATCCTCGGATATGCTGCAGGTTCCTTAGGCAAACTCCACAAAATCTTTCCCTTCACAGAAACCGTAGCATGTAATGTTTTCTGCCAAAACCTCAAGAGTTGTTTCTTTTTCTCCATCCTCCTCTTAATCTTCCTCGCCAGCTTCGCTCTCATCTACGTCAAGGAAACTCCGAAAACGAAGCTTGAGTTGAACGAAGACGACAAACAGGTTTCTTGTTTCGGAGAGTTGTTCCATGCACTCAGAGAATTGAAGAGACCAATGTGGATATTGATGTTAGTAACCGCCGTGAACTGGATCGCGTGGTTCCCGTTCTTCTTGTTCGACACCGACTGGATGGGCCGTGAAGTATACGGAGGAGCTCCAGGAGACAAAGCATATGCCACTGGTGTGAGAGTTGGTTCATTGGGACTCATGCTTAATTCTATTGTTCTTGGATTAATGTCTTTGGCTGTGGAGCCATTGGGGAGATTGGTTGGAGGAATCAAGAGACTTTGGGGGATAGTTAATTTCATTCTAGCTATTTGTTTGGCAATGACTCTCCTAATCACAAAAGTGGCTGAACATGATCGTCATATGACCGGCGGCGCCACCGTCGGACATCCTTCCGACGGTGTCAAAGCCGGTTCCTTGATCTTCTTCGCACTTCTTGGAATCCCTTTAGCAATTACTTTCAGTGTTCCTTTTGCTCTAGCATCAATATACTCAAGTGCTTCAGGGGCAGGACAAGGTTTATCTCTGGGAGTCTTGAATCTTGCAATTGTGATACCACAGATGGTGGTGTCAGCACTAAATGGACCATGGGATGCCCTATTTGGTGGTGGTAATTTGCCGGCGTTTGTGGTGGGTGCGGTGGCGGCCGCCGTCAGTGCTGTATTGGCGATAGTGTTGCTGCCGTCGGTGAAACCAGATGATGAGGCCAAGGTTAAACTTGCTGCTGGCGGTTTTCATTAG 1530 0.4928 MEVKSPTTNNNNNGKGSSFEVDGVQPTPSPICKMIAVASIAAGVQFGWALQLSLLTPYSQTLGVPHAWSSFIWLCGPISGLLVQPIVGYYSDRSTSRFGRRRPFILSGALAVAVSVFLIGYAADLGHSMGDDLSKVTRPRAVTIFVIGFWILDVANNMLQGPCRAFLADLAAGDEKKTRTAMSFFSFFMAVGSILGYAAGSLGKLHKIFPFTETVACNVFCQNLKSCFFFSILLLIFLASFALIYVKETPKTKLELNEDDKQVSCFGELFHALRELKRPMWILMLVTAVNWIAWFPFFLFDTDWMGREVYGGAPGDKAYATGVRVGSLGLMLNSIVLGLMSLAVEPLGRLVGGIKRLWGIVNFILAICLAMTLLITKVAEHDRHMTGGATVGHPSDGVKAGSLIFFALLGIPLAITFSVPFALASIYSSASGAGQGLSLGVLNLAIVIPQMVVSALNGPWDALFGGGNLPAFVVGAVAAAVSAVLAIVLLPSVKPDDEAKVKLAAGGFH 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04903 509 ProSiteProfiles Major facilitator superfamily (MFS) profile. 31 494 IPR020846 GO:0022857
Vifa1g04903 509 PANTHER SUGAR TRANSPORTER 31 489 - -
Vifa1g04903 509 NCBIfam sucrose/proton symporter 30 495 IPR005989 GO:0005886|GO:0008515|GO:0015770
Vifa1g04903 509 MobiDBLite consensus disorder prediction 1 22 - -
Vifa1g04903 509 FunFam Sucrose transport protein 28 490 - -
Vifa1g04903 509 Gene3D MFS general substrate transporter like domains 32 490 IPR036259 -
Vifa1g04903 509 SUPERFAMILY MFS general substrate transporter 35 495 IPR036259 -
Vifa1g04903 509 CDD MFS_SLC45_SUC 34 469 - -
Vifa1g04903 509 Pfam MFS/sugar transport protein 38 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04903 Vifa-Chr1 765005761 765007612 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04903 13 509 Sucrose Transporter Gene Family AT1G22710 66.206 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04903 K15378 - gmx:100784153 723.776