Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04864 ATGGAAGGTTCAACTGGTACAAGGAAAGAAGATAAGAATTCTCAAAAGAATTCAGAATTGAACCAGATTGAACCAGTGACCATTCAAATCTTCTCTTCAGGTTTGCTAGTGAAGGTCACTAACTTGTTCAAGGAATTCCAATATACTGTTAAAGAAACATTCTTTGCTGATGATCCTCTAAGATCCTTCAAAGACCAAACTAAATCAAGAAAGCTAGTTCTTTGTATTGAGGCCATATTCCCAATTATTAACTGGGGGAGAGGCTATAATCTTAAGAAGTTTAGGGGAGATATAATTGCTGGTCTCACTATTGCAAGTATTTGCATACCTCAGGATATTGGATACTCGAAGCTTGCGCATTTGGATCCGCAGTATGGACTGTACTCGAGCTTTGTTCCGCCGCTGATTTATGCCTTCATGGGGAGTTCTCGCAATATAGCAATAGGACCGGTGGCAGTGGTTTCTCTCTTGATGGGGACTTTGCTTAGTAATGAGATTGATCCCGTTACTCATAAAGCAGAATATCAAAGACTTGCTTTTACAGCCACGTTTTTCGCTGGGATTACACAAGCAACTCTTGGGATTTTCAGATTAGGATTCTTGATTGACTTCCTATCCCATGCTGCTATTGTTGGTTTTATGGGAGGTGCTGCCATCACAATTGGCCTTCAACAGCTAAAGGGTTTCCTTGGCATTAAAAGCAAAATGTTCACAACAAAAACTGATATTGTCTCCGTGCTGCATTCAGTGTTTGCATCAGCCAAACATGGATGGAACTGGCACACTATATTAATCGGAGCTAGCTTTTTGTGTTTTCTTCTGCTCGCCAAGTTTATCGTATGA 843 0.4045 MEGSTGTRKEDKNSQKNSELNQIEPVTIQIFSSGLLVKVTNLFKEFQYTVKETFFADDPLRSFKDQTKSRKLVLCIEAIFPIINWGRGYNLKKFRGDIIAGLTIASICIPQDIGYSKLAHLDPQYGLYSSFVPPLIYAFMGSSRNIAIGPVAVVSLLMGTLLSNEIDPVTHKAEYQRLAFTATFFAGITQATLGIFRLGFLIDFLSHAAIVGFMGGAAITIGLQQLKGFLGIKSKMFTTKTDIVSVLHSVFASAKHGWNWHTILIGASFLCFLLLAKFIV 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04864 280 ProSitePatterns SLC26A transporters signature. 123 144 IPR018045 GO:0008271|GO:0008272
Vifa1g04864 280 PANTHER SULFATE TRANSPORTER 43 278 IPR001902 GO:0016020|GO:0055085
Vifa1g04864 280 Pfam Sulfate permease family 94 279 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04864 Vifa-Chr1 759579250 759581959 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04864 41 279 Inorganic Solute Cotransporters AT1G22150 76.987 2.76e-130 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04864 K17470 - gmx:100804208 399.438