Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04825 ATGAATTTGGTTCAGTTACTCGGATGGTGTCGATGCAAAGGTTGCCTCCTACTTGTGTATGACTTCATGGCTAATGGAAGGTTAGACAAGTACTTGTTTGAAAAGACAAAGATTGTGTTAAGTTGGGAACAAAGGTTTAAGATAATAAAGGATGTTGCTTCAGGTACAACAAAAGTGGTGGGAACCTTAGGCTATTTAGCACTAGAGTTACCTAGAACAGGAAAATCATCTACAAGTTGCGATGTCTTAGCATTTAGTGCATTTCTGCTTGAGGTTACTTATGGGAGAAGGCCTATTGAGCCAAAGGAAACACAAGAAGAGTTGGTGTTGGTGGATTTGGTTTGGCAAATGTACAAAGAAGGAAGAATATTTGAAGTAGTGGACAAAAAGTTGAATGAAAAGTTTGATGAAAGTGAGGTAATAATGGTGTTGAAATTGGGATTAATATGTTCAAATGATGTTCCTATTATAAGGCCTAATGAGGGGTTTGATGAATTTTTGCACTCTCTTGCATTTTCCTCAAATGATGTTAGGAGTTCAAGCTCTAATTTTGGAAATACAGACATTGATACTTGTTATATCTCTTTTCCTAGTTCACCTCAGTCACTTCTCAATCCTAGAAGAGAAACAAGATGA 636 0.3679 MNLVQLLGWCRCKGCLLLVYDFMANGRLDKYLFEKTKIVLSWEQRFKIIKDVASGTTKVVGTLGYLALELPRTGKSSTSCDVLAFSAFLLEVTYGRRPIEPKETQEELVLVDLVWQMYKEGRIFEVVDKKLNEKFDESEVIMVLKLGLICSNDVPIIRPNEGFDEFLHSLAFSSNDVRSSSSNFGNTDIDTCYISFPSSPQSLLNPRRETR 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04825 211 PANTHER - 56 160 - -
Vifa1g04825 211 Pfam Protein tyrosine and serine/threonine kinase 2 56 IPR001245 GO:0004672|GO:0006468
Vifa1g04825 211 Gene3D Transferase(Phosphotransferase) domain 1 1 55 - -
Vifa1g04825 211 SUPERFAMILY Protein kinase-like (PK-like) 2 175 IPR011009 -
Vifa1g04825 211 Gene3D Transferase(Phosphotransferase) domain 1 56 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04825 Vifa-Chr1 754303209 754304071 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04825 2 159 Receptor kinase-like Gene Family AT3G55550 48.792 2.80e-55 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vifa1g04825 PK_Tyr_Ser-Thr 1.8e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04825 - - gmx:100784346 261.922