Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04783 ATGGCATCACTCACCAACAACCAAGCCAAATTTGATGTTGAACAACAACCATCAACAATAACAACACTAGAAGTTGAAACAAAAGACTTTGACTACTCGAAAAGATCACAATGGCTACGCGCGGCAGTTTTAGGCGCGAACGATGGATTAGTCTCTACAGCTGCGCTGATGATGGGAGTCGGGGCAGTCAAACAAGACATCAAAGCTATGATCTTAACCGGGTTTGCCGGGCTGGTAGCCGGTGCGTGTAGCATGGCTATAGGTGAGTTTGTTTCGGTTTATTCGCAATTGGATATCGAAGTGGCTCAAATGAAAAGAGAGAAAGAAAGAGGAAGAGAAGTTGGTGATGGTGAAGAGAAGGAAAGTTTGCCTAATCCTTTACAAGCTGCAGCTGCTTCAGCTTTGGCTTTTTCTATTGGTGCAATGGTGCCATTGCTTGCAGCTTTTTTTATAAGTGATTATAAGGTGAGACTTGGTCTTGTTGTGGCTGCAGTTAGTTTTGCTTTGGTTGTTTTTGGTTGGTTTGGAGCTGTGTTGGGTAAGGCTCCAATATTTAGGTCTATTTTGAGGGTTTTGATTGGTGGTTGGGTGGCTATGTCCATTACTTTTGGGCTTACTAAGTTAATTGGGACAAGTGGTCTTTAG 645 0.4326 MASLTNNQAKFDVEQQPSTITTLEVETKDFDYSKRSQWLRAAVLGANDGLVSTAALMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKREKERGREVGDGEEKESLPNPLQAAAASALAFSIGAMVPLLAAFFISDYKVRLGLVVAAVSFALVVFGWFGAVLGKAPIFRSILRVLIGGWVAMSITFGLTKLIGTSGL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04783 214 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 18 209 IPR008217 GO:0005384|GO:0030026
Vifa1g04783 214 Pfam VIT family 39 115 IPR008217 GO:0005384|GO:0030026
Vifa1g04783 214 Pfam VIT family 119 206 IPR008217 GO:0005384|GO:0030026
Vifa1g04783 214 CDD Nodulin-21 37 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04783 Vifa-Chr1 746632274 746632918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04783 5 214 Nodulin-like Gene Family AT3G43660 67.143 6.27e-100 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04783 K22736 - gmx:100815165 314.309