Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04775 ATGGATCCCAATAATCATTTTAACACTCAAAATTCTGCTAATTTTCCATTTAACCAAAATCCCAACAATTTTCCAAATCCCAACAATTATCAAAATCCCAACTATTATCAAAATCCAAATCAATTTTCCAACCAACATCCTCAAAACATACCTAATTTTGGTTTTCCACCAAATTTCAACCAGACATCCTCTGTTCCAAACTTTCAAACATATTATGGATCTATGCCGAGAAATCCATCTCAAACACCCCCGTTTAATGGTTATGTGACAATGGCGAATGCAAATTTTCCAAGTGGTGGTGTACCTGAATTTCCCGAGTTTTCAACACAACTAACTATTGGTGGCATGATTGTTTCTAATGAAGTCGGTCCGAATTCAGAGGATTCAACTCCTAAGAGCAGGAAAACTCAGCAATCAGCATGGAACACTGAACAAAATTTGGTTCTAATTAGTGGGTGGATTAAATTTGGAACAAGCAGTGTTGTCGGGAGAAACCAGAAAGGTGAAACATATTGGGGTAAAATTGCTGAGTATTGTAATGAGCATTGCTCATTCGATCCTCCGCGTGATGGACCTGCATGCCGAAACCGTTTTAATTATATGAACAAAGTGTTGGGTAAATGGATTGGCGCTTATGATGGCGCTAAGCGTATGCAAGGAAGTGGTTGGTCGGAGAATGATGTTTTGGCAAAAGCGCATGAATTATATGCATGTGGGAAGAATGTTAAATTCACTTTAATGGAAGAATGGCACGCTCTCCGTGATCAACCACGTTATGGTAGTCAAGTAGGAGGAAATATTGGCTCAGGAAGTAGTGGATCTAAGAGATCTCGCGAGAGTGATGCATGTGGCTCAAACACTGTAGAATCCAGTGCTCGTCCTATAGGAAGGGAGGCAACTAAAAAAAAGGGTAAAAAGAAAAGCAAGGAATATGCCTCGGAGGTGGTGGACAAAGAATGGGCTGAATACAAAGAATTCAAGACGAAAGAGCTTGAACGATTGGACAACATAGCGTTGATGCAACAGCAGGCTAACAATATAGCCTTGGAGAAGACTAAAACCAAGAAAATGAAGATGTATCTAAAGCTAACTTCCGAAGAGCATCTAGATGACCGGAAGAACCAGTTGTTGAAAAAGTTGGAGGCAGAACTGTTTGATAATTAA 1164 0.3978 MDPNNHFNTQNSANFPFNQNPNNFPNPNNYQNPNYYQNPNQFSNQHPQNIPNFGFPPNFNQTSSVPNFQTYYGSMPRNPSQTPPFNGYVTMANANFPSGGVPEFPEFSTQLTIGGMIVSNEVGPNSEDSTPKSRKTQQSAWNTEQNLVLISGWIKFGTSSVVGRNQKGETYWGKIAEYCNEHCSFDPPRDGPACRNRFNYMNKVLGKWIGAYDGAKRMQGSGWSENDVLAKAHELYACGKNVKFTLMEEWHALRDQPRYGSQVGGNIGSGSSGSKRSRESDACGSNTVESSARPIGREATKKKGKKKSKEYASEVVDKEWAEYKEFKTKELERLDNIALMQQQANNIALEKTKTKKMKMYLKLTSEEHLDDRKNQLLKKLEAELFDN 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04775 387 ProSiteProfiles Myb-like domain profile. 133 202 IPR001005 -
Vifa1g04775 387 MobiDBLite consensus disorder prediction 262 293 - -
Vifa1g04775 387 MobiDBLite consensus disorder prediction 1 27 - -
Vifa1g04775 387 PANTHER - 112 384 - -
Vifa1g04775 387 MobiDBLite consensus disorder prediction 258 308 - -
Vifa1g04775 387 MobiDBLite consensus disorder prediction 122 140 - -
Vifa1g04775 387 MobiDBLite consensus disorder prediction 119 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04775 Vifa-Chr1 745567551 745568714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04775 85 367 Glutathione S-transferase Gene Family AT5G41240 27.451 8.94e-19 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04775 - - tpra:123885584 472.241