Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04772 ATGGGGTTGATTATTGTGTTAGTTTCTTTGATCTTTTCATTGGTAGTGTTACCAATTCTGTGGTTGATGTATAAGACTCGTTCTCCTAAAGAAATGGAAGGTATACCTGGAAATCTAGGGTGGCCTATTGTTGGTGAGAGTTTATCATTTATCTCTGATTTTTCAAGTCCTTCTGGAATCTTTAGCTTCATGAATAAGAGACAAAAGAGATATGGAAAAGTTTTCAAGAGCTTTGTCTTAGGGAGATTCACGGTCTTCATGACAGGGAGAGAAGCAAGCAAGATATTATTAACAGGGAAAGATGGGATTGTGAGTTTGAACTTATTTTACACTGGCCAACAAGTCCTTGGCCCTACCAGCTTGCTTCAAACCACTGGTGAAGCACACAAAAGGCTTAGAAGACTAATTGCTGAGCCTCTATCATTAGATGGTTTGAAAAAATATTTCCATTTTATTAATACTCAAGCAGTGGTTACATTAGATCAATGGGAAGGAAACAAGGTTCATGTTCTTGAAGAAGCTTCTAAATTTACATTGAAAGTGATTGGACACATGATCTTGAGCTTAGAGCCTACCGGAGAGGAACAAGAAAAGTTTAGGTCAAATTTCAAGATAATTTCTTCCTCGTTTTCTTCATTGCCTTTTAAACTTCCCGGGACAGCTTTTCATCGCGGTATCAAGGCGCGCGATAGGATGTACGAAATGTTGGATTCCGTAATTTCACGGAGGAGAAACGGCCAAGATTTCCAACAGGATTTCTTAGAATCCTTAATTATGAAACATAGCAGAAAATCAGATGCACAAGAAGATGCAAATAAACTTACTGATAAGCAATTAAAGGACAATGTATTAACTCTGCTTGTTGCAGGACATGATACCACAACTGCTGCTCTTACATGGCTTATCAAATTTCTTGAAGAGAATCCAAATGTTCTAGAACTACTTAGAGAGGAACATAGAGAAATTATTGCAAACAGAAAAAGTGGAACAGATCTTACATGGTCAGAAGTTAATAACATGTCTTACACAGCAAAAGTGATTAGTGAAACACTTAGAAGAGCCACAATATTACCTTGGTTTTCAAGAAAAGCATCTCAAGATTTTGAAATTGATGGATACAAAGTAAAGAAAGGTTGGTCTTTGAATCTAGATGTTGTTTCAATACACCATGACCCTAAAGATTTTCCTGATCCTTATAAGTTTGATCCATCTAGATTTGATGAACACTTGAGGCCTTTCAGCTTTCTTGGATTTGGCAATGGACCACGTATGTGTCCAGGAATGAACCTTGCTAAGGTTGAAATTTGTGTCTTCATTCATCATCTTGTCACTAGATACAAATGGAGAGCTCTAGAGAAAGATGATTCTGTCCAACCAACACTTGTGAGGATGCCAAAGAATAAGTATCCAATTATAGTTGAGTCACTATAA 1431 0.3704 MGLIIVLVSLIFSLVVLPILWLMYKTRSPKEMEGIPGNLGWPIVGESLSFISDFSSPSGIFSFMNKRQKRYGKVFKSFVLGRFTVFMTGREASKILLTGKDGIVSLNLFYTGQQVLGPTSLLQTTGEAHKRLRRLIAEPLSLDGLKKYFHFINTQAVVTLDQWEGNKVHVLEEASKFTLKVIGHMILSLEPTGEEQEKFRSNFKIISSSFSSLPFKLPGTAFHRGIKARDRMYEMLDSVISRRRNGQDFQQDFLESLIMKHSRKSDAQEDANKLTDKQLKDNVLTLLVAGHDTTTAALTWLIKFLEENPNVLELLREEHREIIANRKSGTDLTWSEVNNMSYTAKVISETLRRATILPWFSRKASQDFEIDGYKVKKGWSLNLDVVSIHHDPKDFPDPYKFDPSRFDEHLRPFSFLGFGNGPRMCPGMNLAKVEICVFIHHLVTRYKWRALEKDDSVQPTLVRMPKNKYPIIVESL 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04772 476 SUPERFAMILY Cytochrome P450 30 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04772 476 CDD CYP90-like 67 474 - -
Vifa1g04772 476 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Vifa1g04772 476 Gene3D Cytochrome P450 24 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04772 476 FunFam Cytochrome P450 family 722 subfamily A polypeptide 1 25 476 - -
Vifa1g04772 476 Pfam Cytochrome P450 36 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04772 476 PRINTS P450 superfamily signature 289 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04772 476 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04772 476 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04772 476 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04772 476 PRINTS E-class P450 group I signature 298 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04772 476 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04772 476 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04772 476 PRINTS E-class P450 group I signature 278 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04772 476 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04772 476 PRINTS E-class P450 group I signature 344 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04772 476 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04772 476 PANTHER CYTOCHROME P450 26 32 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04772 Vifa-Chr1 745438815 745442192 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04772 3 448 Cytochrome P450 AT1G19630 34.368 4.21e-94 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04772 - - gmx:100803766 796.964