Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04752 ATGGAAGGGAATTTATCACAGGGAGGTATAATTCAAGGTGGTGGTAGTGGTTCTTTTGGTTTGCCTGGATCGATGCGAGTTCATCGTCAAGCGTCAATGAACCAACATCAAACTCATCCTTGTCAAGGGTCTGCGGCGCATTCGTCGATCCGTGAAGGTTTTCCTCTTACAATGGGGACATTGCAGAACTGTGATCAGAAGATAGCGATGAACGAGTTTGGTCAGGGGGATAGAAACAAAAACTCGGCAAGTGAGGAAGATGAGCCGGAGGAAGGTGGTGAAGGTCATCAGCAAGAGGGGGCGAGAGGGAAAAAGGGGTCGCCTTGGCAGCGTGTGAAGTGGACTGATAAGATGGTGAGGCTTTTGATAACGGCGGTGTCTTATATTGGCGAGGACGGGACTTCAGAAGGTGGTGGTGGTGGAGGAAGGAGGAAATTCGCGGTTTTGCAGAAAAAGGGTAAGTGGAAATCTATTTCTAAGGTTATGGCTGAAAGAGGTTATCGTGTTTCGCCTCAGCAATGCGAGGATAAGTTTAATGATCTTAATAAAAGGTACAAAAGGCTTAACGACATGCTTGGAAGGGGAACTTCTTGTCAAGTTGTTGAAAATCCTTCTTTGTTGGATGTTATCGATTTTCTTAACGAGAAAGAAAAGGACGATGTTAGAAAAATATTAAACTCGAAACAACTCTTCTATGAAGAGATGTGTTCCTACCATAATTGCAATAGATTGCATTTGCCGCATGATCCCGCATTGCAACGGTCCTTGCAGATAGCTCTCAGAAATAGAGATGATCATGATAACGATGATGTGAGAAAGTCCTATCACGATGACCACGACGAGGATAGTCACGATATGGAAACTGATGATCATGATGAGTTCGAAGAGAATTATGCTTCCCATTGTGATAGTCGAGGAATCTTCGGAGGATTGGGAGGATCTACAAAAAGACTAAGACAAGGCCAAGGTCAAGGTCAAGAAGACGCTACTACTTTCGGGAACTCTTTAAACTGTCTGGAGTATAACAAAAGTTTGTATCCTCATGGACACATCGCGCAACCTGACGGAAACCAAGCTTTACCCGAAAACATGAGAGCAGCTTTGTTACAGAAGCAATGGATTGAATCTCGTTCGGTTCAGTTGGAAGAACAGAAGCTACAAATTCAGGTTGAGATGATGGAATTAGAGAAAGAAAGATTCAAGTGGCAGAAGTTTAGCAAGAAAAAAGACAGAGAGTTGGAGATGTTCAAGCTGGAGAATGAAAGAATGAAGATCGAGAACGAACGTATTGCTTTGGAGCTAAAACGGAAGGAGATTGGCAGCACCAGCTTTAACTAG 1338 0.4365 MEGNLSQGGIIQGGGSGSFGLPGSMRVHRQASMNQHQTHPCQGSAAHSSIREGFPLTMGTLQNCDQKIAMNEFGQGDRNKNSASEEDEPEEGGEGHQQEGARGKKGSPWQRVKWTDKMVRLLITAVSYIGEDGTSEGGGGGGRRKFAVLQKKGKWKSISKVMAERGYRVSPQQCEDKFNDLNKRYKRLNDMLGRGTSCQVVENPSLLDVIDFLNEKEKDDVRKILNSKQLFYEEMCSYHNCNRLHLPHDPALQRSLQIALRNRDDHDNDDVRKSYHDDHDEDSHDMETDDHDEFEENYASHCDSRGIFGGLGGSTKRLRQGQGQGQEDATTFGNSLNCLEYNKSLYPHGHIAQPDGNQALPENMRAALLQKQWIESRSVQLEEQKLQIQVEMMELEKERFKWQKFSKKKDRELEMFKLENERMKIENERIALELKRKEIGSTSFN 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04752 445 MobiDBLite consensus disorder prediction 73 110 - -
Vifa1g04752 445 PANTHER F16F4.11 PROTEIN-RELATED 1 440 - -
Vifa1g04752 445 MobiDBLite consensus disorder prediction 263 291 - -
Vifa1g04752 445 Gene3D - 114 187 - -
Vifa1g04752 445 Coils Coil 408 438 - -
Vifa1g04752 445 Pfam Myb/SANT-like DNA-binding domain 111 238 IPR044822 -
Vifa1g04752 445 Coils Coil 378 398 - -
Vifa1g04752 445 MobiDBLite consensus disorder prediction 263 282 - -
Vifa1g04752 445 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04752 Vifa-Chr1 742937752 742939089 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vifa1g04752 Myb_DNA-bind_4 1.7e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04752 - - gmx:100812134 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04752 1 742937752 742939089 Vifa1g04752 1 742937752 742939089 ECH