Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04745 ATGGAGAATTGCGATTTTGCTTCTAGAATTTTAGAAGAACCTTCAAACGACGAGAGTTGCAAGAGGAAGAACAAGAAAACAAAGGCAAATAGGGAAAGATCAAACAAGCCATCAAAGAAACTAAAGAAGAAAAGCAGCAACAAGGCGGAACTCCCGTTGGCGTTTAAAGAAAAAATTGAACAAATGGGAGGCGATGAGGTGAAGTTCGTGATCGAGAAGGAACTAACCAACAGTGATGTGACCGAAACCAATGGTCGTCTCTCCGTCCCAAAAGGAAAGATTAACGAGAGTTTTCTAACACCAGCGGAGGAATCGTACTTGAATTATGAGCGTAATAAACAAGAGAAGATTGCTGGTATTTATGTATCTCTGTTGGATCATGATCTTAACCTTTGGGATGAAATGTGCTTAAAGAAGTGGAAAATGGAGACCGCTGAAGTCTACAATATCACAGATGGATGGAACGAACTTCTAGCAGATAACAAATGGAAAAAAGGCCAAAAGGTGTTGGTGCAACTTTGGTCTTTCAGATGCAACCACAAGCTCTACTTTGCACTCGTCAAGCTTTCAAAAGACGAGTAG 582 0.4072 MENCDFASRILEEPSNDESCKRKNKKTKANRERSNKPSKKLKKKSSNKAELPLAFKEKIEQMGGDEVKFVIEKELTNSDVTETNGRLSVPKGKINESFLTPAEESYLNYERNKQEKIAGIYVSLLDHDLNLWDEMCLKKWKMETAEVYNITDGWNELLADNKWKKGQKVLVQLWSFRCNHKLYFALVKLSKDE 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04745 193 MobiDBLite consensus disorder prediction 11 25 - -
Vifa1g04745 193 MobiDBLite consensus disorder prediction 26 43 - -
Vifa1g04745 193 MobiDBLite consensus disorder prediction 1 48 - -
Vifa1g04745 193 Pfam B3 domain-containing protein At2g31720-like 60 158 IPR005508 GO:0003677
Vifa1g04745 193 SUPERFAMILY DNA-binding pseudobarrel domain 70 180 IPR015300 -
Vifa1g04745 193 Gene3D - 67 193 IPR015300 -
Vifa1g04745 193 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 15 192 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04745 Vifa-Chr1 742450258 742450839 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04745 55 186 B3 DNA Binding Superfamily AT1G05930 31.343 2.76e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04745 - - psat:127082192 252.677