Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04744 ATGTCAGCAACATTTATGAGAATTGTCGTTCCTCTATCATTTGTTTTATTGTTTGTAGTTGTATCTGAAGCAGGGATCCTTCCCCATCTAGTTCATATAGAAATCACGAATAGGTTAAATGATGAGAAAGATTTAACCATTCATTGCTACGAAAGAGAAGGTGAAGATCTCGGAGAGGCGATCCTTCTATCTCTTGAGAAACTCTCCTTTGTTTTCAGGCCAAGAGGAATTGGTAAATCGAGCAAGTATTATTGTAGCGTTAAATGGAGTGGTTCAAATCTCAAATGGTTTGATTTGTGGTCACAAGGAAGGGATTATAAGAATTGCAGAGTTTGCAAATGGATTGTTACAAATACGCAAGCTTGTGAGTTTGATTATGATAAAGGAATTTATTCTATTTGTGTTGTTTACAATCAATGA 420 0.3548 MSATFMRIVVPLSFVLLFVVVSEAGILPHLVHIEITNRLNDEKDLTIHCYEREGEDLGEAILLSLEKLSFVFRPRGIGKSSKYYCSVKWSGSNLKWFDLWSQGRDYKNCRVCKWIVTNTQACEFDYDKGIYSICVVYNQ 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04744 139 Pfam Plant self-incompatibility protein S1 32 135 IPR010264 -
Vifa1g04744 139 PANTHER - 31 123 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04744 Vifa-Chr1 742436097 742436516 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04744 33 138 Carbohydrate Esterase AT3G16970 28.182 7.26e-11 54.7