Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04741 ATGTCTCTAACGTTGATGAAAATTGTTGTTCCTATATCACTTGTATTATTGCTAGTAGTTGTATCTGAAGCTCTGATCTTTCCCAAACAAGTACATTTAGAGGTCACCAATCGTTTATCTAATAAAAGAGAATTATACCTTCATTGCTATGAAAGATATGGTGATGATCTAGGCGAGTACATACTCTTTCCTGGCGGGCAGTTCATATATTCTTTCAAGCCAAGAATAATTGGTAAATCGAGCAAGTATTATTGTAGTGTTAAATGGATTGGTTCCAAACTCAAATGGTTTGATTTGTGGTCACAAGGAAGGGACAGTAACGCAGGTCAATTTATCAAATGGACCCTAGAAGAGAATGAAGCTTGTAGGTTTGATAATACAGGATCTAATTATCTTTGTGTTGCCTACAATCCATGA 417 0.3573 MSLTLMKIVVPISLVLLLVVVSEALIFPKQVHLEVTNRLSNKRELYLHCYERYGDDLGEYILFPGGQFIYSFKPRIIGKSSKYYCSVKWIGSKLKWFDLWSQGRDSNAGQFIKWTLEENEACRFDNTGSNYLCVAYNP 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04741 138 PANTHER - 27 125 IPR010264 -
Vifa1g04741 138 Pfam Plant self-incompatibility protein S1 32 131 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04741 Vifa-Chr1 741328615 741329031 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04741 35 137 Carbohydrate Esterase AT3G16970 25.000 2.32e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04741 - K23857 psat:127123072 132.88