Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04739 ATGTCTCAAATATTGATGAGAATTGTTGTTCCTATATCACTTGTTTTATTGCTAGCAGCTGTAACTGAAGCAATAACCTGGCCCGGTGGAGTGAACGCAGTGGTCACCAATGCTTTATCTAATAACAAAATTTTAGGCCTTCATTGCTATGAAAGGTTAGGTCAAGATTTAGGCGAGAAACAACTCCCACCTGGCGGGGAGTTCAAAACTTATTTCATCCCAAGACTTATTTTTAATTCGAGCAAGTATTTTTGTAGTGTTATTTGGGCTGGTTCCAACCTCCAATGGTTTGATCTGTGGTCTAAAGGAAGGGATTGGGGAGAAGGCCCAAATATCAAATGGAACGTAACAGATAAAGAAGCTTGTAGGTTTGAAAATCGTACAGGAAAGTATTCTCTTTGTGTTCCCTACAATCAAGGAAATAATGTACCTTAA 435 0.3885 MSQILMRIVVPISLVLLLAAVTEAITWPGGVNAVVTNALSNNKILGLHCYERLGQDLGEKQLPPGGEFKTYFIPRLIFNSSKYFCSVIWAGSNLQWFDLWSKGRDWGEGPNIKWNVTDKEACRFENRTGKYSLCVPYNQGNNVP 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04739 144 PANTHER - 34 125 IPR010264 -
Vifa1g04739 144 Pfam Plant self-incompatibility protein S1 34 136 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04739 Vifa-Chr1 741056107 741056541 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04739 31 139 Carbohydrate Esterase AT3G16970 24.779 7.69e-09 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04739 - K01999 psat:127123072 137.502