Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04733 ATGGAAAAAATAAATTGGAGACATTATAGCAGCCAAGCTAAAGTGATAGGAACTATAGTATCAATGACCGGAGCATTTGTTGTGATATGGTACAAGGGTCCACCAATCTTCAAGATACATTCATCAAGTTCTTACAACACACTTCGCTTTTCACCAAATTTGAACTGGATTTTGGGAGGGTTGTTAAGTGCTGGAGATTCTTTAGCTTCATCCATATGGTACATATATCAGGTTTCATTAACAAAGAAATACCCTGCTCTAATAGTGATAGTCTTCTTTCAAGTACTTTTCATAACAATTCAATCTGGAGTATATGCTTTAATTGTGGTTAGAGATCCTAGTGCATGGGAACTAAATCTTGATATGGGGTTGATTGTCATTTTTTACCAGGCAATATGTGCAATAGGAATTCGGTACTGCCTACAAATATGGTGTGTACAAAGAGCTGGTCCTCTCTTTTGTGCTATGTTCAAACCAATAGGAATCATCTTCACCGTTTTATTGGGTTTTATTTTTCTTGGAGATGACTTTTACCTTGGAAGTTTGATTGGTGCGATTATAATAGTGATGGGATTTTATGTTGTGCAATGGGGGAAAGCTTCGGAAGAGAAAGTTGAGAGAGGGATGGAAAACATGGAGAGCCTGTGCAATGATGTTCCATTGTTACAAAACAAAACATAA 681 0.3686 MEKINWRHYSSQAKVIGTIVSMTGAFVVIWYKGPPIFKIHSSSSYNTLRFSPNLNWILGGLLSAGDSLASSIWYIYQVSLTKKYPALIVIVFFQVLFITIQSGVYALIVVRDPSAWELNLDMGLIVIFYQAICAIGIRYCLQIWCVQRAGPLFCAMFKPIGIIFTVLLGFIFLGDDFYLGSLIGAIIIVMGFYVVQWGKASEEKVERGMENMESLCNDVPLLQNKT 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04733 226 PANTHER WAT1-RELATED PROTEIN 1 209 IPR030184 GO:0016020|GO:0022857
Vifa1g04733 226 SUPERFAMILY Multidrug resistance efflux transporter EmrE 120 200 - -
Vifa1g04733 226 Pfam EamA-like transporter family 63 195 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04733 Vifa-Chr1 740579079 740580017 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04733 1 225 Nodulin-like Gene Family AT3G28070 38.961 2.37e-50 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04733 - - tpra:123906754 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04733 1 740579079 740580017 Vifa1g04733 1 740579079 740580017 ECH
Vifa1g04733 1 740579079 740580017 Vifa4g03252 4 1020442125 1020443750 ECH
Vifa1g04733 1 740579079 740580017 Vifa5g00496 5 116608462 116611658 ECH