Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04728 ATGGAGATTGAAGGAGCAAGTGTAACAGCAGCAATGGTTACAGTTCAATTCCTGGAAGTAGGTGGTGACACACTAATGAAATCAGCAACTAAAGATGGAATGAGTAGTTTCATTTTCACTGTTTATTCAAATCTTTTTGCTCTATGTGTCCTTCTACCAACCACTCTTTTCTACCATAGAAAAAGAACTCCTCCTCCAATTTCAACATCAATTTTCTGCAGAATATTTCTTCTTAGTTGCTTCCAAGCTTCAGTGCAGATTTTGACCAACACTGGAATTAGATATAGCTCTCCCACTTTGGCATCAGCTATGGTTGATCTTGTCCCTGCTTTTACCTTCATATTTGCTTTAATTTCAAGGATGGAAATTCTAAATTTGAAACAACATAGTAGTCAGGCAAAAGTTATTGGTACAATGATCTGCATTGCAGGGGCATTAACTGTGACATTATATAAAGGAATACCATTAATTAGTAATGCCTTTCCAAATATAGAAATGGGAGCTCGTGGAATTAACATCGCAGGAAAATCAGATTGGATAGTTGGGGCTATTCTTCTTGCAGCTGCTAGCTTTTGCCTTTCAATTTTACATATAGTTCAGACTTGGATTATGAAGGAATATCCAGAAGAGCTAGTGGTAACAACTATTTGTTGCATTTTTGTGGTAATCCTATCTTCCATTGTCGCTCTCATTTCAGAGGGTATTTCAAAAGCTTGGATACTTAGACTTAATAAGGAGTTTGTATCTTTGTGTTACTCGGCAATATTTTTGGTATCAACAAGGAGCGTTGTAACCATATGGGCATGTCGTAAGAAAGGACCCATATATGTAGCTATATTCAAACCATTAAGAGTTGTCGCTGCACTTGGCATGGGAGTAATATTTCTGGGAGACAATCTCTATCTTGGAAGCATGATTGGAGCTGCTATTATAATTATTGGATTTTATGGTGTAATGTGGGCCCAGGCTCAAGAGAAACACATAAAAAGTGAAAATAACATCCTCTCATCTTCAACGGCTCTTTTGTCAGACAAAAGGATGGATATCTAA 1050 0.3714 MEIEGASVTAAMVTVQFLEVGGDTLMKSATKDGMSSFIFTVYSNLFALCVLLPTTLFYHRKRTPPPISTSIFCRIFLLSCFQASVQILTNTGIRYSSPTLASAMVDLVPAFTFIFALISRMEILNLKQHSSQAKVIGTMICIAGALTVTLYKGIPLISNAFPNIEMGARGINIAGKSDWIVGAILLAAASFCLSILHIVQTWIMKEYPEELVVTTICCIFVVILSSIVALISEGISKAWILRLNKEFVSLCYSAIFLVSTRSVVTIWACRKKGPIYVAIFKPLRVVAALGMGVIFLGDNLYLGSMIGAAIIIIGFYGVMWAQAQEKHIKSENNILSSSTALLSDKRMDI 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04728 349 PANTHER WAT1-RELATED PROTEIN 9 330 IPR030184 GO:0016020|GO:0022857
Vifa1g04728 349 Pfam EamA-like transporter family 24 149 IPR000620 GO:0016020
Vifa1g04728 349 Pfam EamA-like transporter family 182 319 IPR000620 GO:0016020
Vifa1g04728 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04728 Vifa-Chr1 740220181 740229363 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04728 11 344 Nodulin-like Gene Family AT3G28050 42.687 1.15e-80 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04728 - - gmx:100793168 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04728 1 740220181 740229363 Vifa1g04728 1 740220181 740229363 ECH