Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04725 ATGTTGAGCGAAGGAGCAAGTGTAACAGCAGTAATGGTTACAGTTCAATTCCTGGAAATGGGTGGTAATACTCTTATCAAAGCAGCAACCAATGATGGAATGAGTATTTATATTTTCACTTTTTATTCAAATCTTTTTGCTCTATGTGTCCTTCTACCAACCACTCTTTTCTACCATAGAAAAAGAGCTACTCCTCCAATTTCTACATCAATTTTCTACAGATTGTTTCTTCTTAGTTGCCTAAGTACTTCATCGCAGATTATGATGAATACTGGAATTAGATGCAGCTCTCCCACGTTGGCTTCTGCTATGATTGACCTTGTCCCAGCTTTTACCTTCATACTTGCTGTTATTTCAAGGATAGAAAATCTAAATTTGAAACAACATAGCAGTCAGGCTAAAATTATTGGTACAGTGGTATCCATAGCAGGGGCATTAGTTGTGACATTATATAAAGGGATACCATTGATTAGTGGTGTTTTTCAAAATATAAAAATGGGAGCAAGTGGTATGTACCTCACAGGGAATTCAAATTGGATACTTGGTGCTTTTCTTCTGGCAACTGCTAGCTTTTTCCTTTCTGTTTTATTTATCACCCAGACTTGGATTATTAGAGATTATCCTGAAGAGTTAGTGGTAACAACCATTTGTTGCAGTTTGGTGGTAATTCTATCTGCAATTGTAGCTCTCACTGTAGAAGGGTATTCTAAAATTTGGATATTGAGATGTAATAAAGAGTTGGTGTCTATATGTTATTCAGCAATTTTTACTGTATCAATGAGGAGTGTTGTGTATGCATGGGCATTCCGAAAGAAAGGACCAATATATGTAGCTATGTTTAATCCTTTGGGAATGATCATTGCACTTGCCATGGGGGTAATATTTTTGGGAGACAATCTTTATCTTGGAAGCATGATTGGAGCTATTATAATAGCGATTGGATTTTATGCTGTGATGTGGGCACAAGCTCAAGAGGAATACAAAACAAGCCAAAATAATATTTCCAAATCTTCTTTGGTCCCTCTTTTATTCGATTGA 1038 0.3622 MLSEGASVTAVMVTVQFLEMGGNTLIKAATNDGMSIYIFTFYSNLFALCVLLPTTLFYHRKRATPPISTSIFYRLFLLSCLSTSSQIMMNTGIRCSSPTLASAMIDLVPAFTFILAVISRIENLNLKQHSSQAKIIGTVVSIAGALVVTLYKGIPLISGVFQNIKMGASGMYLTGNSNWILGAFLLATASFFLSVLFITQTWIIRDYPEELVVTTICCSLVVILSAIVALTVEGYSKIWILRCNKELVSICYSAIFTVSMRSVVYAWAFRKKGPIYVAMFNPLGMIIALAMGVIFLGDNLYLGSMIGAIIIAIGFYAVMWAQAQEEYKTSQNNISKSSLVPLLFD 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04725 345 Pfam EamA-like transporter family 181 319 IPR000620 GO:0016020
Vifa1g04725 345 Pfam EamA-like transporter family 24 149 IPR000620 GO:0016020
Vifa1g04725 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 152 - -
Vifa1g04725 345 PANTHER WAT1-RELATED PROTEIN 9 330 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04725 Vifa-Chr1 739360440 739377076 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04725 12 341 Nodulin-like Gene Family AT5G40230 43.750 1.14e-84 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04725 - - gmx:100793168 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04725 1 739360440 739377076 Vifa1g04725 1 739360440 739377076 ECH