Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04724 ATGGAAACTTGGTTAGTAATAACAATTTTGTGTCTTATTCTTTCATTAATTCTCAGATTCATAAGTAAACTTATCTCCCCTAAATCTCCCCTACCTCCAGGACCTCCAAGAGTACCTTTCATAGGAACCTTCACTTTGCTACAAGAATATTTTAAGGATCCAAAAACCCTTATTCAAAATCTTAATGCCAAATATGGTCCAATTTTTACTCTTCAAATGGGTTCTCACACAGACATTTTCATTGCAAATAGGTTTCTTGCACATCAAGCTTTAATTCAAAATAGCACCATCTTCGCGGATCGGCCTAAGGCCGAACCAACAAAAAAAATAATTAGCAGCAATCAACATGACATCCTTTTCAGCTTCTACGGTCCCATTTGGCGCCTTTTAAGACGCAACCTCACTTCAAGAATACTTCATCCTTCACAAATCAAATCCTATGCTCAAGCGCGCAAATGGATGTTAGACATTCTTCTACAACGTCTCAAATATGATTCGCACGAAAATAAATATGTTTCCGTCGTTGACCATTTTCGATATGGCATGTTCTCTTTGTTGGCTCTCATGTGTTTTGGCGATAAACTAGATGAGAATCAAATAAGAGAAATCGAAGAAAGTCAACGTGTCATGCTTCTTAATTTTTCTAGATACAATGTTTTAAATTTTTGGCCACAAATTACAAGGATATTATTTCGGAACCGATGGAAGGAGTTTTTGAAGCTGAGGAGTGATCAAGAAGCTTTGTTGATTCCTTATATAAACGCTAGAAGAAAAATCAAAGAAGATAGATTAAGTAAAGACATAGACAACAATGTCAATGAGCCATATGATGAATTTGTTTTATCCTATGTTGATACATTGTTGGATTTGAAATTGTTGGAGGAAGATAATAAAAAGATTAAACTTGATGATGGTAAAATCTGCACATTATGTTCCGAGTTTCTAAACGCGGGAGCAGATACAACTTCAACCGCATTAGAATGGATCATGGCGAATTTGGTGAAGTACCAAGATATACAAGAAAAGCTTGTGGAAGAGATTAAAAGGGTGATTGGTGATAAAGAAGAGAAGGAAATTGAAGAAGAAGATTTGCGAAAAATGCATTATCTTAAAGCTGTGATTTTGGAAGGGTTAAGGCGTCATCCACCGCTACATTATGTTGCTCCTCATAGAGTAACAAAAGAAGTTGTTATAAATGGTTATTTGGTGCCTACTTTTGCATCGGTTAATTTTTTAGTGGCTGAGATAGGGAGGGATGCTTCTGCTTGGGATGATCCTATGAGTTTTAAGCCGGAGAGGTTTATGAATAAGGATAGTTTTGATATAATGGGGAGTAAAGAGATAAAGATGATGCCGTTTGGGGCGGGGAGGAGAATGTGTCCTGGCTATGGTTTATCATTGTTGCATTTGGAGTATTTTGTTGCAAATTTTGTTTGGAATTTTGAGTGGAGAAATGTGGATGGAATTGAGGTTGATTTGTTGGAGAAGCTGCAATTTACAATAGTCATGAAGAATCCTTTGAAGGTTCATCTAATACCTAGGGTTTAG 1548 0.3643 METWLVITILCLILSLILRFISKLISPKSPLPPGPPRVPFIGTFTLLQEYFKDPKTLIQNLNAKYGPIFTLQMGSHTDIFIANRFLAHQALIQNSTIFADRPKAEPTKKIISSNQHDILFSFYGPIWRLLRRNLTSRILHPSQIKSYAQARKWMLDILLQRLKYDSHENKYVSVVDHFRYGMFSLLALMCFGDKLDENQIREIEESQRVMLLNFSRYNVLNFWPQITRILFRNRWKEFLKLRSDQEALLIPYINARRKIKEDRLSKDIDNNVNEPYDEFVLSYVDTLLDLKLLEEDNKKIKLDDGKICTLCSEFLNAGADTTSTALEWIMANLVKYQDIQEKLVEEIKRVIGDKEEKEIEEEDLRKMHYLKAVILEGLRRHPPLHYVAPHRVTKEVVINGYLVPTFASVNFLVAEIGRDASAWDDPMSFKPERFMNKDSFDIMGSKEIKMMPFGAGRRMCPGYGLSLLHLEYFVANFVWNFEWRNVDGIEVDLLEKLQFTIVMKNPLKVHLIPRV 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04724 515 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04724 515 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04724 515 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04724 515 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04724 515 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04724 515 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04724 515 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04724 515 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04724 515 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04724 515 SUPERFAMILY Cytochrome P450 32 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04724 515 FunFam Cytochrome P450 family protein 25 515 - -
Vifa1g04724 515 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04724 515 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04724 515 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04724 515 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04724 515 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 507 - -
Vifa1g04724 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Vifa1g04724 515 Gene3D Cytochrome P450 26 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g04724 515 CDD CYP77_89 64 508 - -
Vifa1g04724 515 Pfam Cytochrome P450 32 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04724 Vifa-Chr1 738909839 738911386 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04724 1 514 Cytochrome P450 AT1G64940 54.352 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04724 K24184 - gmx:100816275 695.656