Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04723 ATGAAGATTAGTTTGCTAGGGTTTATGGCAATCTTGGAAAAACATAAACCTTATGTTTCAATGATCTTTATTCAATTCATATATGCAGGAATGGCTCTTCTTTCAAAAGTAGCAATATCCAAAGGAATGAGTCCTTATGTGTTTGTTGTTTATCGCCAAATCTTTGCTTCACTTGCCTTGTCTCCATTTGCTTATTTTGACAGTAAGCATGGTGCTCCATTATCATGCAACTTGTTGTGCAAATTGTTTCTAGTTTCTCTTGTTGGGTTAACAGCAAGTTCAAACCTTTATTATGTTGCAATCAACTATACCTCTGCAACATTTGCTGCTGCTTCCACAAACACAATCCCTTCAATTACTTTCATCATGGCAATTTTAATTGGGGTTGAAACCATATCAATAAAATACAAGCATGGAGTGGCAAAGATTTTGGGCTCTGTTCTAAGCCTTTCTGGTGCTATAGTATTTGCTGTAGTTAAAGGACCACCATTAGATTTCATAAAGTGGCATTCAGAAAATCAGAATCATAATTCTCATGAATTTTCAAAACTTCATTCCAAAGGAGATAATATTAAAGGCTCTCTTATGATGCTCTCAGCAAATACTTTTTGGTCCTTATGGCTTATTTTGCAGGGATTTATTGTAAAGCAATACCCAGCAAAATTTAGGCTCACATTGATACAATGCTTTTTTAGCTTTATACAATCAGGAATATTAGCTATTGCAATGGAGAGGAATCCTTCTGCATGGAAGCTAGGATGGGATATTCATCTTCTTTCTGTGGCTTATTGTGGTGTAATTGTGACTGGTATTTGTTATTGGTTGCAACTATGCACTATAGAGAAGAAAGGTCCAGTTTTCACTGCAATGTTTACCCCTCTAGCTCTTGTACTTACAGCAATTTTCTCAGCAATTTGGTGGAAAGAAACACTCTTTTGGGGAAGTATTGGTGGCACTGCTTTGCTAGTGATTGGACTGTATAGTGTGTTGTGGGGGAAGAATAAGGAGTGTGTAATAAAACAGGTTGTAGAAGAAAAAGCAGAAACTAGATTGGAGTGCGTTATACAGTGTGATGGATTTGATAAAGTTTAA 1092 0.3617 MKISLLGFMAILEKHKPYVSMIFIQFIYAGMALLSKVAISKGMSPYVFVVYRQIFASLALSPFAYFDSKHGAPLSCNLLCKLFLVSLVGLTASSNLYYVAINYTSATFAAASTNTIPSITFIMAILIGVETISIKYKHGVAKILGSVLSLSGAIVFAVVKGPPLDFIKWHSENQNHNSHEFSKLHSKGDNIKGSLMMLSANTFWSLWLILQGFIVKQYPAKFRLTLIQCFFSFIQSGILAIAMERNPSAWKLGWDIHLLSVAYCGVIVTGICYWLQLCTIEKKGPVFTAMFTPLALVLTAIFSAIWWKETLFWGSIGGTALLVIGLYSVLWGKNKECVIKQVVEEKAETRLECVIQCDGFDKV 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04723 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 150 - -
Vifa1g04723 363 PANTHER WAT1-RELATED PROTEIN 16 343 IPR030184 GO:0016020|GO:0022857
Vifa1g04723 363 Pfam EamA-like transporter family 16 150 IPR000620 GO:0016020
Vifa1g04723 363 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020
Vifa1g04723 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04723 Vifa-Chr1 738843836 738848556 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04723 12 336 Nodulin-like Gene Family AT2G39510 40.122 8.27e-79 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04723 - - lja:Lj0g3v0009669.1 564.688