Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04717 ATGGAAGAACATCATCTTACTCCATTAGCTGTTACTCATCTTCTTCAACACACTCTAAGAAGTTTGTGTATCCATGATAATTCTCAATGGGTTTATGCTGTTTTCTGGAGGATCTTGCCTAGAAACTACCCTCCTCCCAAGTGGGAAGGACAAGGGGCTTATGATAGATCAAGAGGAAACAGAAGAAATTGGATATTGGTTTGGGAAGATGGATTCTGCAACTTTGCAGCATCAGCAGCAGCACCTGAAATAAACAACTCTGGTGGTGATTGTCCTAACTCATCTTCATCGGTTTATGGAAACTGCGAGTTAATTCAGCCTTACCAAGGTCTTCAACCTGAGCTTTTCTTCAAGATGTCACATGAGATCTATAACTATGGAGAAGGGTTGATTGGAAAAGTAGCTGCAGATCACAGTCATAAATGGATATATAAAGAACCTAATGATCAAGAAATTAATTTCTTGTCAGCATGGCATAATTCAGCAGACTCACACCCTAGGACTTGGGAAGCTCAGTTCTTGTCTGGTATTAAGACCATAGCCCTCATTGCTGTTAGAGAAGGTGTTGTTCAATTAGGAGCTGTTCACAAGGTGATTGAAGATTTGAGCTATGTAGTTCTACTGCGGAAAAAGTTCAGCTACATCGAAAGCATACCGGGAGTACTTCTCCCACACCCTTCATCATCTGCATACCCTTATGGTGGTCCATCAGAACAATGGCATAATTTTGCACCACAGCATCATCAACATGGTGACCAAATATATGATCATTTCATGAACAACAACAACAACATGCCAATGAAAGTAACTCCATCAATGAGTAGTCTCGAAGCATTACTCTCAAAGTTACCTTCAGTTGTTCCACCACCACAACAACATCAACAACAGCTACAAACACAAACACAACATGTTTTAGCACCATTGCGATTCATGGGAGGAATGCAAAAAGTTGCAAAGGAAGAGTTAGATGAAGAAGAGCAAGAAGAGGTGTATAGACCTGAACAACTTGATGTTGGTGAGAGTAGTAGTTCTATGTCGGGATACCATCATCATCAACAACATCAACATCAACATCATTTTCATCAAAATATTACAGGGAATAATGGATCCAACAATATTAATGGATTTTGA 1131 0.3979 MEEHHLTPLAVTHLLQHTLRSLCIHDNSQWVYAVFWRILPRNYPPPKWEGQGAYDRSRGNRRNWILVWEDGFCNFAASAAAPEINNSGGDCPNSSSSVYGNCELIQPYQGLQPELFFKMSHEIYNYGEGLIGKVAADHSHKWIYKEPNDQEINFLSAWHNSADSHPRTWEAQFLSGIKTIALIAVREGVVQLGAVHKVIEDLSYVVLLRKKFSYIESIPGVLLPHPSSSAYPYGGPSEQWHNFAPQHHQHGDQIYDHFMNNNNNMPMKVTPSMSSLEALLSKLPSVVPPPQQHQQQLQTQTQHVLAPLRFMGGMQKVAKEELDEEEQEEVYRPEQLDVGESSSSMSGYHHHQQHQHQHHFHQNITGNNGSNNINGF 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04717 376 MobiDBLite consensus disorder prediction 359 376 - -
Vifa1g04717 376 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 356 - -
Vifa1g04717 376 MobiDBLite consensus disorder prediction 337 376 - -
Vifa1g04717 376 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 15 212 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04717 Vifa-Chr1 737155472 737157509 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04717 16 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.313 9.97e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04717 - - vun:114173114 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04717 1 737155472 737157509 Vifa1g04717 1 737155472 737157509 ECH