Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g04558 | ATGTACCTTAATTTCCACTTTCTATTTTCAATTCTTCTCATCTTCACCACCGTCGTCACCGCCGTCAACCCCGGCACCACTCTCTCCGCTTCCAATACCAACCAATCATGGTCCTCCCCGTCTTCCCTTTTCTCCCTCCGCTTCCTCCCCGTCGATCCCCCAACCTCCCCTCCCACCTTCCTCGCCGCCATCGTCTACTCCGGCGGAGCTCCCATCGTCTGGACAGCCGGTAACTCCCTCCCCGTCGACTCCGGTGGCTCCCTTCAGTTCCTAACCAGCGGCTCCCTCCGTCTCGTCAACGGCTCCGGCACCACCGTCTGGGACTCCGGAACCGCCAACCTCAACGCCAAATCAGCCACAGTTGATGATAGCGGCAGATTGGTGATCTCGAATGGAACGAATGATATTTGGTCTAGCTTTGATCATCTTACAGATACTCTTTTGCCTTCTCAGAATTTCAGTGTTGGTAAGGTTTTGAAATCTGGTTCTTATTCGTTTAATTTATCGAATGTTGGGAATTTGAGTTTGTTTTGGAATGATAGTGTAAATTTTTGGAATCAAAGTTTGAATTCTACTGTGAATCAGAATTTGACTTCACCTGTTTTGAGTTTAACATCTATTGGGATTTTGCAACTTTCTGATGTGAATTTGAGTATTCCTGTTGTTATTGCTTATAGTAGTGACTATGCTGATGCTGGTAGTGGTGGGAGTGATGTTCTTAGGGTTTTGAAATTGGATAGTGATGGGAATTTGAGGATTTATAGTACTTCTCGAGGTAGTTCGAATCCGATTGTTCGATGGGCTGCTGTTCAAGATCAGTGTCAGGTTTATGCTTACTGTGGGAACTATGGGATATGCAGTTATAATAATACGAATCCTGTTTGCGGTTGTCCGTCGAAGAATTTTGAGATGGTTAGTGGTGTTAGGCAAGGGTGTAGGAGGAAAGTGAGCCTTGGTGATTGTCGAGGGAATGAAACTATGTTGTCGTTGGATCATACTCAGTTGTTGACTTATCCGCCGGATACTGAGTCGCAGACGTTTTTTATGGGTATATCGGCGTGTAGAGGAAATTGTCTCTCGGGTTCGGGTGCTTGTTTTGCTTCTACTTCTATGTCGGATGGGACGGGACTATGTTATATTAAGTCGGTGGATTTTGTGAGTGGTTATAATAGTCCTACATTGCCTAGTACTTCTTATGTCAAGGTTTGTCCGCCGTTGGATCCGAATCCGCCGCCATCTTTAGGGGAGACGGCGAGGGAGAAGAGTTCGAGAGTACCGGCTTGGGTTGTTGTGGCTGTTGTTTTGGGGACTCTTTTAGGCGTGGTTGCTATTGAAGGTTGTTTTTGGTTTTGGTGTTGTCGGAAAACTGCAAGGTTTGGTGTATTGTCGGCTCAGTACGCTCTTCTTGAGTATGCTTCTGGTGCGCCGGTTCAGTTCACGTACAAGGAGCTTCAGCGCTCGACGAAAGGGTTCAAGGAGAAGCTTGGAGCGGGTGGATTTGGGGCAGTGTATAGAGGTGTTCTTGTTAACAAAACTGTTGTTGCAGTGAAACAGCTTGAAGGAATTGAACAAGGTGAGAAACAGTTTAGGATGGAAGTTGCAACTATAAGCAGTACTCATCATCTTAATTTGGTGAGACTTATCGGTTTTTGCTCGGAGGGACGCCACAGGCTTTTAGTGTACGAGTTCATGAAAAACAGTTCGCTGGATAATTTTTTGTTCCCGAAAGAAGAGCAATCGGGAAAACAGTTGAATTGGGAGTATCGGTTCAATATCGCACTTGGCACTGCAAGAGGAATCACATACCTTCATGAGGAGTGTCGCGACTGCATTGTCCACTGTGATATCAAACCTGAAAACATTCTCTTGGACGATAATTATGTCGCTAAAGTCTCTGATTTCGGTCTTGCAAAGCTCGTTAACCCAAAAGACCATAGACACAGAACCTTGACAAGCGTGCGAGGAACAAGAGGATATTTAGCCCCTGAGTGGATTGCAAATCTTCGCGTAACATCCAAATCTGATGTTTACAGCTACGGCATGGTTTTGTTAGAGATTGTGAGCGGAAGGCGGAACTTTGATGTTTCCGACGAAACAAATCGGAAGAAATTCTCCATTTGGGCCTATGAAGAGTTTGAGAAAGGCAACATCAAAGGAATTTTGGATAAAAGGCTTGCAGATATAGAAATCGATATGGAGCAAGTTACAAGAGCGATTAAGGTATGCTTTTGGTGCATCCAAGAGCAGCCGTCGCAAAGACCGGTGATGAGCAAAGTTGTTCAAATGCTAGAAGGTGTAAAAGAAATTGACAAGCCTCCACCTCCTAAATTGGTTGTTGAAGGACCAGTTAGCGGAACCAGCACCTACATTAGTAGCAATGTTAGCGCGTTTACCACAATTGGAGCCTCGCCAAATGTTCCTTCTTCATCATCATCAATTCAAACTAGTGGTGTTTCAAACTTCGCCTTGGGAAGAAACCCTGAGAAGGCAACTTCATCCCTTTTACAGTCAGAAGACCTATGA | 2523 | 0.4526 | MYLNFHFLFSILLIFTTVVTAVNPGTTLSASNTNQSWSSPSSLFSLRFLPVDPPTSPPTFLAAIVYSGGAPIVWTAGNSLPVDSGGSLQFLTSGSLRLVNGSGTTVWDSGTANLNAKSATVDDSGRLVISNGTNDIWSSFDHLTDTLLPSQNFSVGKVLKSGSYSFNLSNVGNLSLFWNDSVNFWNQSLNSTVNQNLTSPVLSLTSIGILQLSDVNLSIPVVIAYSSDYADAGSGGSDVLRVLKLDSDGNLRIYSTSRGSSNPIVRWAAVQDQCQVYAYCGNYGICSYNNTNPVCGCPSKNFEMVSGVRQGCRRKVSLGDCRGNETMLSLDHTQLLTYPPDTESQTFFMGISACRGNCLSGSGACFASTSMSDGTGLCYIKSVDFVSGYNSPTLPSTSYVKVCPPLDPNPPPSLGETAREKSSRVPAWVVVAVVLGTLLGVVAIEGCFWFWCCRKTARFGVLSAQYALLEYASGAPVQFTYKELQRSTKGFKEKLGAGGFGAVYRGVLVNKTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNSSLDNFLFPKEEQSGKQLNWEYRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDDNYVAKVSDFGLAKLVNPKDHRHRTLTSVRGTRGYLAPEWIANLRVTSKSDVYSYGMVLLEIVSGRRNFDVSDETNRKKFSIWAYEEFEKGNIKGILDKRLADIEIDMEQVTRAIKVCFWCIQEQPSQRPVMSKVVQMLEGVKEIDKPPPPKLVVEGPVSGTSTYISSNVSAFTTIGASPNVPSSSSSIQTSGVSNFALGRNPEKATSSLLQSEDL | 840 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g04558 | 840 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 564 | 773 | - | - | |
Vifa1g04558 | 840 | PIRSF | SRK | 1 | 815 | IPR024171 | GO:0004674 | |
Vifa1g04558 | 840 | ProSiteProfiles | Bulb-type lectin domain profile. | 144 | 266 | IPR001480 | - | |
Vifa1g04558 | 840 | Pfam | D-mannose binding lectin | 72 | 157 | IPR001480 | - | |
Vifa1g04558 | 840 | SMART | blect_4 | 28 | 143 | IPR001480 | - | |
Vifa1g04558 | 840 | CDD | STKc_IRAK | 495 | 765 | - | - | |
Vifa1g04558 | 840 | FunFam | S-receptor-like serine/threonine-protein kinase | 462 | 563 | - | - | |
Vifa1g04558 | 840 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 18 | 142 | - | - | |
Vifa1g04558 | 840 | Gene3D | - | 143 | 269 | IPR036426 | - | |
Vifa1g04558 | 840 | MobiDBLite | consensus disorder prediction | 803 | 840 | - | - | |
Vifa1g04558 | 840 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 611 | 623 | IPR008271 | GO:0004672|GO:0006468 | |
Vifa1g04558 | 840 | SUPERFAMILY | Protein kinase-like (PK-like) | 472 | 764 | IPR011009 | - | |
Vifa1g04558 | 840 | ProSiteProfiles | Bulb-type lectin domain profile. | 19 | 142 | IPR001480 | - | |
Vifa1g04558 | 840 | Gene3D | - | 18 | 141 | IPR036426 | - | |
Vifa1g04558 | 840 | ProSiteProfiles | Protein kinase domain profile. | 489 | 766 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g04558 | 840 | Pfam | S-locus glycoprotein domain | 239 | 298 | IPR000858 | GO:0048544 | |
Vifa1g04558 | 840 | Pfam | Protein kinase domain | 492 | 761 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g04558 | 840 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 143 | 269 | - | - | |
Vifa1g04558 | 840 | Gene3D | Phosphorylase Kinase; domain 1 | 460 | 563 | - | - | |
Vifa1g04558 | 840 | PANTHER | OS07G0415500 PROTEIN | 8 | 775 | - | - | |
Vifa1g04558 | 840 | ProSitePatterns | Protein kinases ATP-binding region signature. | 495 | 517 | IPR017441 | GO:0005524 | |
Vifa1g04558 | 840 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 71 | 188 | IPR036426 | - | |
Vifa1g04558 | 840 | SMART | serkin_6 | 489 | 763 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g04558 | 840 | Gene3D | Transferase(Phosphotransferase) domain 1 | 564 | 772 | - | - | |
Vifa1g04558 | 840 | Pfam | PAN-like domain | 321 | 387 | IPR003609 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g04558 | Vifa-Chr1 | 712133196 | 712135718 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g04558 | 462 | 773 | Receptor kinase-like Gene Family | AT5G20050 | 43.692 | 9.40e-81 | 265 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Vifa1g04558 | Pkinase | 1.2e-51 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g04558 | - | - | cam:101506838 | 1413.28 |