Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04536 ATGGATAATCATTCCACCAATAACAACAATGACAGTTCTAGAATTTCATCTGTTCAGTTAGAATCTGCTTCTAACCGACAACCAACCCCTTTCCGTAAGATGATAGCAGTTGCTTTTATTGCTGTTGGCATCCAGTTCGGTTGGGCCCTACAGCTATCTTTATTGACACCTTACATCCAACTGCTTGGCGTCCCACATAAATGGGCCGCCAACATCTGGTTGTGCGGTCCTATTTCAGGCATGATCATCCAACCGATTGTCGGTTATTACAGTGACCGTTTACGTTCTCGTTTTGGTCGTCGCCGTCCATTCATATTCTTCGACGCTATTGCAGTTGCGATCGCAGTCTTTCTCATCGACTATACAGCTGATCTCGGTCACTCCTTCGAAGATGATCTCAAGAAAAAGACACGACCAAAAGTTGTTGTCATCTTTGTATTCGGATTCTGGATACTTGACTTTGCTAATAACATGCTCCAAGGACCTTGTCGTGCCTTCATCGGCGACCTTGTCGCTGAAGACCATAAAAGAATGAGAACAGGTAATGCACTATTCTCGTTCTTCATGGTTGTCGATAATGTCCTTGGTTATGCAGCAGGCTCTTACCGTAAACTCTTCATGATGCTCCCTTTCACTAAAACCGAAGCCTGCAACGAGTTTTGCGCAAATCTTAAAACTTGTTTCTTCATTGCAATATTTCTCCTTATCGTACTTTCAGCCTTTGCTCTTCTTCACGTAGAAGACATTCCATTACCAGTTGTAGAATCACAATCACAGACACAAATACAAACACAATCAGAACCAGAACAACAGGTTTCGTGTTTCGGAGAAATACTAGGTGCATTCAACGGACTATAA 858 0.4277 MDNHSTNNNNDSSRISSVQLESASNRQPTPFRKMIAVAFIAVGIQFGWALQLSLLTPYIQLLGVPHKWAANIWLCGPISGMIIQPIVGYYSDRLRSRFGRRRPFIFFDAIAVAIAVFLIDYTADLGHSFEDDLKKKTRPKVVVIFVFGFWILDFANNMLQGPCRAFIGDLVAEDHKRMRTGNALFSFFMVVDNVLGYAAGSYRKLFMMLPFTKTEACNEFCANLKTCFFIAIFLLIVLSAFALLHVEDIPLPVVESQSQTQIQTQSEPEQQVSCFGEILGAFNGL 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04536 285 Gene3D MFS general substrate transporter like domains 31 250 IPR036259 -
Vifa1g04536 285 SUPERFAMILY MFS general substrate transporter 32 255 IPR036259 -
Vifa1g04536 285 Pfam MFS/sugar transport protein 40 241 - -
Vifa1g04536 285 PANTHER SUGAR TRANSPORTER 30 273 - -
Vifa1g04536 285 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04536 Vifa-Chr1 708106662 708107519 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04536 9 283 Sucrose Transporter Gene Family AT1G66570 57.455 1.54e-110 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04536 K15378 - gmx:100782007 332.798