Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04529 ATGGTAGCAATTGCTTCCATTGCAGTCGGCATCCAATTCGGTTGGGCTCTACAACTATCTTTATTAACACCGTACATCCAGCTGCTTGGCGTCCCACATAAATGGGCTGCTAACATCTGGCTGTGCGGCCCGATTTCTGGCATGATCATTCAACCGATCGTCGGATATTACAGCGATCAGTTACGTTCTCGTTTTGGGCGACGTCGTCCCTTCATCTTCTTCGGCACCATTGCGGTCGCGATTGCAGTCTTTCTCATCGGCTATGCAGCTGATCTCGGTTACGCCTTCGACGACGATCTCAAGAAAAGGACACGGCCGAAAGCTATTGTCGTCTTTGTATTCGGATTCTGGATATTCGGATTCTGGATATTCGACGTCACTAATAACACGCTCCAAGGACCTTGTCGTGCCTTCATCGGCGACCTTGCCGTTGAAGACCATAAAAGAATGAGAACAGGCAACGCGCTGTTCTCGTTCTTCATGGTCGTCGGTAATGTCCTTGGTTATGCAGCAGGCTCTTACCGTAAACTCTTCATGATGCTCCCTTTCACAAAAATCAAAGCATGCAACGAGTTTTGCGCAAATCTTAAAACTTGTTTCTTCATTGCAATATTTTTCTTTATCGTACTTTCAACCTTCGCTCTTCTTTACGTAGAAGACATTCCGTTACTATTATTAGAATCACAATCGCAAACACATACACAAACACAACCAGAACAACATATTTCGTATTTAGGAGAAATACTAGGTGCATTCAACTGCCTACAAAAACCAATGTGGATGCTAATGTTGGTAACAACTATAAACTGGGTTACATGGTTTCCATTTTTCTTGTTCGACACAGATTGGATAGGTCAGGAAGTCTACGGGGGAGATCCCGACAACAACGCATACAACCGTGGAGTTCGTGCCAGAGCAATGGGGCTCATGATCAATGATGTTGTGCTTGCTTTAATGTCGTTAGCGGTGGCGCCATTAGGGCGTTTTATTGAGGGTGCAAAAAGACTTTGGGGGATTGTGAATATCATTCTTGCTGTTGGACTTGTTATGACTATAGTTATTACCAAGGCAGCTCAGCATGAACGCCGCGTCAGCGATAGTAATACGCATTTTGCTGAGATTAAGGCTGCCTCATTCGTTTTCCTCGCTGTCTTAGGAATCCCTCTTGCGATTAATTTCAGTGTCCCGTTTGCTTTAGCATCTATTTACTCAAGCGCAACAGGAGTTGGACAAGGTTTATCTTTGGGAGTTCTTAATATTGCAATTGTCCTTCTACAAGTTTAG 1284 0.4439 MVAIASIAVGIQFGWALQLSLLTPYIQLLGVPHKWAANIWLCGPISGMIIQPIVGYYSDQLRSRFGRRRPFIFFGTIAVAIAVFLIGYAADLGYAFDDDLKKRTRPKAIVVFVFGFWIFGFWIFDVTNNTLQGPCRAFIGDLAVEDHKRMRTGNALFSFFMVVGNVLGYAAGSYRKLFMMLPFTKIKACNEFCANLKTCFFIAIFFFIVLSTFALLYVEDIPLLLLESQSQTHTQTQPEQHISYLGEILGAFNCLQKPMWMLMLVTTINWVTWFPFFLFDTDWIGQEVYGGDPDNNAYNRGVRARAMGLMINDVVLALMSLAVAPLGRFIEGAKRLWGIVNIILAVGLVMTIVITKAAQHERRVSDSNTHFAEIKAASFVFLAVLGIPLAINFSVPFALASIYSSATGVGQGLSLGVLNIAIVLLQV 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04529 427 CDD MFS_SLC45_SUC 1 427 - -
Vifa1g04529 427 SUPERFAMILY MFS general substrate transporter 3 421 IPR036259 -
Vifa1g04529 427 NCBIfam sucrose/proton symporter 1 427 IPR005989 GO:0005886|GO:0008515|GO:0015770
Vifa1g04529 427 PANTHER SUGAR TRANSPORTER 2 427 - -
Vifa1g04529 427 Coils Coil 427 427 - -
Vifa1g04529 427 Gene3D MFS general substrate transporter like domains 1 222 IPR036259 -
Vifa1g04529 427 Pfam MFS/sugar transport protein 6 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04529 Vifa-Chr1 707043307 707044923 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04529 1 427 Sucrose Transporter Gene Family AT1G71880 57.506 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04529 K15378 - gmx:100782007 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04529 1 707043307 707044923 Vifa1g04529 1 707043307 707044923 ECH