Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04514 ATGGCTTCTGATGCCTTCACCGACAAGAACGCCGTGTTCAGAAAACTCAAAACCAAATCTGAAAACAAGTCCTATTTTGATTGTAATGCAAAGAATCCGACCTGGGCGTTGGTACCGTATGGGATCTTCCTCTGCATTAAATGTGATGATGAAGTTGATGGTAATTTGAGGAATCATCATAATCATGTTACTAAAGAGAATTGTGATTCTTTGTCTTCTGTTATCACTGAGCAACATAGTGAGGAACATAATATGAATTTATCTAGATTATATCCTGAATTACATGATGTGTCGTTGGAAAGGAATGACGATGATATAAAGGATTTGGTAGGTATTTAG 339 0.3658 MASDAFTDKNAVFRKLKTKSENKSYFDCNAKNPTWALVPYGIFLCIKCDDEVDGNLRNHHNHVTKENCDSLSSVITEQHSEEHNMNLSRLYPELHDVSLERNDDDIKDLVGI 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04514 112 ProSiteProfiles ARF GTPase-activating proteins domain profile. 10 48 IPR001164 GO:0005096
Vifa1g04514 112 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 5 48 - -
Vifa1g04514 112 Gene3D Arf GTPase activating protein 1 108 IPR038508 -
Vifa1g04514 112 SUPERFAMILY ArfGap/RecO-like zinc finger 11 90 IPR037278 -
Vifa1g04514 112 Pfam Putative GTPase activating protein for Arf 12 103 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04514 Vifa-Chr1 704252572 704253160 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04514 14 82 C2H2 Transcription Factor Family AT4G21160 36.232 2.13e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04514 K12493 - sspl:121796134 92.8189