Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vifa1g04506 | ATGCAGAAACATCCATACAATTCCATGGAACCTCGAAAGGAGGAATTCCATTCTGCACCACAACCGGTCCTGCAAGACCATCTGGATGGCATGCATGCCAATACAAGGCCTCCTCCTCCTTCCTTTAACGCGTCGGAAAATAAACCTGTACATAATTTCTCCATACAGACCGGTGAGGAATTCGCTCTCGAGTTCATGAGGGACAGGGTGAATGTGAATCTCAAGAAGCCTTCGTTTCCAAATGTTGTCGGTGATCCTAATTACTCGACAGGGTATATGGAATTTAAAGGCCTTTTAGGCCATAAAGGATCTGAGAGTGGTTCCGATATTTCTATGCTTGCAAATAATGAAAAAGGTCCGAAAGAGTTTGACAGAAGGAACTCTGCTCTACATCAAGAAAGAAGTAATTATGGCTCGGGTCGATCAATTCCTAGAATGTCGTCTAATCAAGATAATAACCGAGTCCTTCACGGCATTTCTTCTTCTGGATCTTCTGACAGCTTATCAATGAGGATGAAGATTCTATGCAGTTTTGGTGGTAGAATATTACCGCGGCCAAGTGATGGAAAGCTTAGATATGTCGGGGGTGAAACACGGATCATTAGCATTAGAAAGGACATAAACTGGCCGGAGCTTATGCAGAAAATATCGTCAATCTATAATGATACTCGGGTAATAAAGTATCAGCTCCCCGGAGAAGATCTCGATGCCCTAGTTTCAGTAACGTCTGATGAGGATCTACGGAATATGATGGAGGAATGTCATGATCTACAAAGAAGGAGAGGATCGCTAAAGCTTAGGATGTTCCTATTCTCTATAAATGATTTGAATGATACTCAGTTTGATCTAGGTAGCATGGATGGTGGTGATTCTGAAGTCCAGTATGTAGTTGCTATTAATGGCATGAACATGGAATCAAGAAGCAACTCTATACTTCGTTTTGCTGGAAGTTCGAATGATATACAGGAATTAGACCGACAAACTATTGACAGGGAAACTAAAAGAGCTGTGGTTGAGTCATATGGTGTCGGCAGTTCTTCCTTGACTGGAAATGTTAACCCGGTATCGACAATTCAGCCTTCGCAACCAATGCTACCAACATCCTCAAATGCTTATGAAGCCTATCCGTTCTTTTACGAGGATCCGATCATTCAACAAGGGGGAACTAGTCAATATCAAATGCATAATGGCCCTTTTCCTTCGAACAGTTCGGCTCGCAATCTAGCAGACGCTCCGGTTTCTCTGCCTACTTTTGGTGTTGCCAGCCAAGGAATCGCGAGCGAAGGACAAGCAATGGCATCCAGTGAGTTGCAAGTAAGTTCTCTTCCTTCACGTCCATTTGAGGGAAGTTTGCAAGGTAACTTATCCGAGGCATCAGTTCCAGCGGCTGTATCAGAAGCACTTCATCCTGCAATGCCATTAGAAAACAAGATTTCAGCTGCTGAATCAGAAGTGCTGAATCCTACACAGGTTTCAAGATCTGGTGAAGATGACTTCTATCCTGCATCCACAGACGCATTCAGTCGTGCTCTTGTTGACGCTGAGTCCAATATAATCGATTTCAGTTGCCTTGAACCGCCTCCGCTTCCTAATAGAGTATATTATTCGGAGAGAATTATTCCCAGGGAACATGCAGATTTGTTGAACCGGTCTGCAAAGTCAGACGATGCATATGGTTCGCACTTACTCATGGCAGATTTACTTTCTGATTTGAACCGTATGAACTCAGTTAGCGAATCCAGTGACATGTTTCACAATGAGAATTTGTCGAATTTGAACACGGTGTCCAACTCATCAGCAAAGCCCTTGCGTGCAGATGGCCATGCCACCAGCAGCAAACATTTTCCTGATGCAACAAGTCAGGTGAAGCCAAAGTTATATCAGCTCGTGGATTCTGATTTGAAGCCGGTATTGTCAGATAACAAAATTTCTGAAAATGAGACAATTACCTCCAAAGATAGCCATAAAATTCTCCCAGTTGATGAAACCAAGGGCACTGAGAATCTTGCTTTTCGCCGGGTTCCTTCTGTTGAACATAATGAGAACCTAGCATCTAAACTTCAAGACCAAAATTTGTCTGAGGCTCCTACAAGGGAACCTCTTGATGCTAAATCCAAACCTTCTCAGGGTGACATTCTGATTGATATCGAAGACAGGTTTCCCCGTGATTTCCTTTATGATATGTTCTCGAAAGCAGTTCATTCTGAAGATTCCGCAAACATTAGTCCATTGCCAGCTGATAGAGCAGGTTTGAGCTTGAAAATGGACAATCATGAGCCTAAAAGTTGGTCATACTTTCAGAAGTTGGCACATGAAGGGTTTGATAATGTTTCTTTAATTGATCAGGATAATATCGGGTTTTCATCAGCTGTAAGCAAAGTAAAAGAAGGAGATAGTAAGTTCAATATTTCCGCTCCTCCACCAGCAGACGTTATTGTTTTGACAGGACCCAAGGAATCTCATTCCATCATAAATTTTGGAGAGGAAAATCAGAAAACCTTACCTGTAACTACTAAAACCGAGGCTATTGTATTTCAACCAGAAAACAACCATTCGGAACTTAAGGCAAATGAAAATAAGAACATCAACGCCTCCCCGGTGGAAAACGTTAGGCCACAGGAGTCTGAATATCAGGATGGCAATAATGAGGCAAGGGACGTGGTTGTAGCTCCTCAAGATATTAGTTTTGACGATTTTGACATTAGTACTTTGCAGATCATAATGAATGCGGATCTTGAAGAGCTGAGAGAACTCGGTTCTGGCACTTTTGGGACTGTGTATCATGGAAAATGGCGGGGATCAGATGTTGCAATTAAAAGAATAAAGAAAAGTTGTTTCTCCGGTCGGTCTTCAGAACAAGAAAGACTGACGATAGAGTTCTGGCGGGAAGCTGACATACTTTCTAAGCTTCATCATCCAAATGTGGTGGCATTTTATGGCGTGGTGCAAGATGGACCGGGAGGAACAATGGCCACTGTTACGGAGTTCATGGTGGATGGTTCTCTTCGACATGTCTTGCTACGAAAGGATAGGTACCTTGATCGCCGCAAGAGGCTGATAATAGCCATGGATGCAGCATTTGGAATGGAGTATTTACATGCAAAAAATATTGTTCATTTTGACTTGAAATGTGACAATTTGCTTGTGAACTTGAAAGATCCTTTACGGCCAATATGCAAGGTTGGCGATTTCGGCCTGTCAAAAATCAAGCGGAATACCCTGGTGACTGGTGGTGTGCGTGGAACTCTACCGTGGATGGCACCAGAGCTGCTGAATGGGAGCAGCAATAAGGTCTCAGAAAAGGTTGATGTATTCTCCTTTGGGATTGTTTTATGGGAGATTCTTACCGGTGAGGAGCCATATGCTAATATGCATTATGGTGCAATCATAGGAGGTATTGTGAACAACACACTAAGACCTACCATCCCAAGTTATTGTGATCTAGAATGGAGAACACTGATGGAGCAGTGTTGGGCACCTAACCCTGCAGTCAGGCCATCGTTTACAGAAATAGCGCGCCGCTTGCGTGTGATGTCTGCAGCTGCTGCTAGTCAGACCAAAGGACAAGGACACAAAGCATCTAAATGA | 3588 | 0.4317 | MQKHPYNSMEPRKEEFHSAPQPVLQDHLDGMHANTRPPPPSFNASENKPVHNFSIQTGEEFALEFMRDRVNVNLKKPSFPNVVGDPNYSTGYMEFKGLLGHKGSESGSDISMLANNEKGPKEFDRRNSALHQERSNYGSGRSIPRMSSNQDNNRVLHGISSSGSSDSLSMRMKILCSFGGRILPRPSDGKLRYVGGETRIISIRKDINWPELMQKISSIYNDTRVIKYQLPGEDLDALVSVTSDEDLRNMMEECHDLQRRRGSLKLRMFLFSINDLNDTQFDLGSMDGGDSEVQYVVAINGMNMESRSNSILRFAGSSNDIQELDRQTIDRETKRAVVESYGVGSSSLTGNVNPVSTIQPSQPMLPTSSNAYEAYPFFYEDPIIQQGGTSQYQMHNGPFPSNSSARNLADAPVSLPTFGVASQGIASEGQAMASSELQVSSLPSRPFEGSLQGNLSEASVPAAVSEALHPAMPLENKISAAESEVLNPTQVSRSGEDDFYPASTDAFSRALVDAESNIIDFSCLEPPPLPNRVYYSERIIPREHADLLNRSAKSDDAYGSHLLMADLLSDLNRMNSVSESSDMFHNENLSNLNTVSNSSAKPLRADGHATSSKHFPDATSQVKPKLYQLVDSDLKPVLSDNKISENETITSKDSHKILPVDETKGTENLAFRRVPSVEHNENLASKLQDQNLSEAPTREPLDAKSKPSQGDILIDIEDRFPRDFLYDMFSKAVHSEDSANISPLPADRAGLSLKMDNHEPKSWSYFQKLAHEGFDNVSLIDQDNIGFSSAVSKVKEGDSKFNISAPPPADVIVLTGPKESHSIINFGEENQKTLPVTTKTEAIVFQPENNHSELKANENKNINASPVENVRPQESEYQDGNNEARDVVVAPQDISFDDFDISTLQIIMNADLEELRELGSGTFGTVYHGKWRGSDVAIKRIKKSCFSGRSSEQERLTIEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHAKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDLEWRTLMEQCWAPNPAVRPSFTEIARRLRVMSAAAASQTKGQGHKASK | 1195 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vifa1g04506 | 1195 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Vifa1g04506 | 1195 | Pfam | PB1 domain | 188 | 271 | IPR000270 | GO:0005515 | |
| Vifa1g04506 | 1195 | Coils | Coil | 247 | 267 | - | - | |
| Vifa1g04506 | 1195 | ProSiteProfiles | Protein kinase domain profile. | 912 | 1177 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Vifa1g04506 | 1195 | FunFam | Octicosapeptide/phox/Bem1p domain kinase superfamily protein | 191 | 273 | - | - | |
| Vifa1g04506 | 1195 | MobiDBLite | consensus disorder prediction | 675 | 708 | - | - | |
| Vifa1g04506 | 1195 | FunFam | Octicosapeptide/phox/Bem1p domain kinase superfamily protein | 1000 | 1193 | - | - | |
| Vifa1g04506 | 1195 | PRINTS | Tyrosine kinase catalytic domain signature | 994 | 1007 | IPR001245 | GO:0004672|GO:0006468 | |
| Vifa1g04506 | 1195 | PRINTS | Tyrosine kinase catalytic domain signature | 1031 | 1049 | IPR001245 | GO:0004672|GO:0006468 | |
| Vifa1g04506 | 1195 | PRINTS | Tyrosine kinase catalytic domain signature | 1102 | 1124 | IPR001245 | GO:0004672|GO:0006468 |
Showing 1 to 10 of 30 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vifa1g04506 | - | - | mtr:120578222 | 2036.15 |
Showing 1 to 1 of 1 entries