Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04501 ATGGGAGTTGATCAAAAAGCTGAGAGTTTTTGGTTAAGAATCGCTGCCAATTATAACCAGTATCGTGGGCAATCGCGGGAAAAGTTAGGCGGGCAATTAAAATGTCGATGGCATCGAATAAATGGCTTGGTTCAAAAATTTGTTGGGTGTTACAAACAAGTTGTTAATGGAAAAAAAAGTGGGACATCGGAGAACGATATCATGGTTGCTGCACATGCTTTTTTTGCTCAGGATGAAGGTACAGCATTCAATCTTGAGTATGTATGGCGATTGTTAAAAGATGAACCTAAATGGATGGGAGAATCGATTGGAAATTCTTCAAAAATTACAAAGAGCTCTACTAGTGGGGCATCATCAGATAACCCAAATACAACTTCAAGTTATGAGTTTAACTTATCATCACCAATGGAGCGTCCAATGGGACAAAAAGCAGCAAAAAGGAAGGGTAAGGCAAAGGAAATTCCAAATGCAATGCAAGATGCAAGGATTAAAAGAGCAGCGGCAATGGAAAGACTAGCTCAATGTAAGGAGGACGAGCTAGAACTAAAGGCAATGAATATCATCATGAAAGACACTTCTACTATGAATGATAATCAACGAGATATTCATGAAAAATATTGTAATAAGATGAAAAAAAAATGGAATGTAGTTAGTATCATTGACGTAAAATGGTCATTAGTACCACTTTAA 690 0.371 MGVDQKAESFWLRIAANYNQYRGQSREKLGGQLKCRWHRINGLVQKFVGCYKQVVNGKKSGTSENDIMVAAHAFFAQDEGTAFNLEYVWRLLKDEPKWMGESIGNSSKITKSSTSGASSDNPNTTSSYEFNLSSPMERPMGQKAAKRKGKAKEIPNAMQDARIKRAAAMERLAQCKEDELELKAMNIIMKDTSTMNDNQRDIHEKYCNKMKKKWNVVSIIDVKWSLVPL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04501 229 PANTHER - 2 213 - -
Vifa1g04501 229 Pfam No apical meristem-associated C-terminal domain 83 201 IPR029466 -
Vifa1g04501 229 Coils Coil 158 178 - -
Vifa1g04501 229 MobiDBLite consensus disorder prediction 103 133 - -
Vifa1g04501 229 MobiDBLite consensus disorder prediction 103 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04501 Vifa-Chr1 701230905 701231594 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04501 4 179 Glutathione S-transferase Gene Family AT5G41240 30.645 1.01e-19 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04501 - - psat:127115199 332.028