Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04461 ATGATGAGTTTTCTCACTTCTATCTTCAAGCTATTATTTTTTTATGTCATTATTTTCCTCCCAACACTTGTTTCATGTGATTCATCTACATGTGAGAATGAACCAAACAAAGAAAACAACAGACTAGCCCTTCATTACAAACTTGGCTCAATTGCTTCCATCCTTGTTTGTGGTGCTCTTGGTGTAAGTTTACCATTACTAAGCAAAAGAATTCCAATTCTAAGCCCTAGAAATGACATATTTTTCATGATCAAAGCCTTCGCGGCCGGGGTAATTCTAGCAACCGGTTTTATTCATATACTTCCCGAAGCGTTCGAGAGTTTAAATTCCTCTTGTATTAACGAAAAGCCTTGGGGAGATTTTCCACTCGCCGGACTCGTTGCTATGCTGTCATCGATCGGAACTTTAATGGTTGATTCGTTCGCTTCGAGTTTTTATCAAAGGAGACATTTTAAAAATTCTTCCAAACAAGTTTCTCATGAAGATTTAGAAATGGGTGATGAACATGTTGGTCATATACATGTTCATACACATGCTACTCATGGTCATACTCATGGATCAACTAACTCTTCTCAAGATGCAATATCATCTGAATTAATTCGGCAACGGATTATATCACAAGTTTTGGAGTTAGGAATTGTGGTCCATTCAGTGATTATTGGAATGTCTTTAGGTACATCACAAAGCATTGATACCATAAAGCCTCTTCTTGTGGCCTTGTCTTTTCATCAATTTTTTGAAGGAATGGGGCTTGGTGGTTGCATATCTCAGGCGAAATTCGAGTCAAGGTCGACAACAATTATGGCTACATTTTTCTCCCTAACAACACCAATTGGGATAGCAATTGGGATGGCAGTATCAAGTGGATACAAAGAGAATAGTCCAACTTCTCTAATAGTTGTAGGAGTTCTAAATTCTGCTTCAGCTGGAATTTTGATTTACATGGCATTAGTTGACCTATTAGCTGCAGATTTTATGAGTCCAAGGTTACAAAATAATTTGAAGATTCAAATAGGAGCAAATATTTCACTTCTTTTAGGTTCAGGTTGCATGTCTTTATTGGCTAAATGGGCCTAA 1077 0.3733 MMSFLTSIFKLLFFYVIIFLPTLVSCDSSTCENEPNKENNRLALHYKLGSIASILVCGALGVSLPLLSKRIPILSPRNDIFFMIKAFAAGVILATGFIHILPEAFESLNSSCINEKPWGDFPLAGLVAMLSSIGTLMVDSFASSFYQRRHFKNSSKQVSHEDLEMGDEHVGHIHVHTHATHGHTHGSTNSSQDAISSELIRQRIISQVLELGIVVHSVIIGMSLGTSQSIDTIKPLLVALSFHQFFEGMGLGGCISQAKFESRSTTIMATFFSLTTPIGIAIGMAVSSGYKENSPTSLIVVGVLNSASAGILIYMALVDLLAADFMSPRLQNNLKIQIGANISLLLGSGCMSLLAKWA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04461 358 NCBIfam ZIP zinc/iron transport family 32 358 IPR004698 GO:0005385|GO:0016020|GO:0071577
Vifa1g04461 358 PANTHER ZINC/IRON TRANSPORTER 43 351 - -
Vifa1g04461 358 Pfam ZIP Zinc transporter 45 355 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04461 Vifa-Chr1 692533130 692535210 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04461 11 358 Inorganic Solute Cotransporters AT3G12750 60.282 3.26e-148 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04461 K14709 - gmx:100805124 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04461 1 692533130 692535210 Vifa1g04461 1 692533130 692535210 ECH