Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g04459 | ATGGACACTCAAAATCTAACTATACATTTCATTCTTCTGATTTTCATTCCCTTTTCATTCTCTTCTTTCATTCCTGTAGACAACTATCTTCTCAACTGTGGATCAAATACCAATGTTACCCTTTTCAACAGGCTTTTCATAGGTGATGATTTCACCAACAAAGGTTCAATTTTGATCTCTGCAGACCAATCAATTTCCTCAACCAACCAAAACCCTCCTCCAAATTTGTCTACTTTGTATCAAACTGCAAGAGTTTTCACCAAAATGGGAAGTTACAGATTCCTCTTGAAGCAAAATGGTACCTTCTTTGTTCGTTTTCTTTTCTCATCTTTTAAGGCTCAAGGTTTTGATCTAAAAGATGCAAACTTTAGTGTCTTGGTTGGTGGAAAATTGATTTTGAATAGTTTCAATCCTAAGGCTGGTACTAATGATGAAGTTATTAAAGAGTTTGTTATGAAAGTGGAATCAAATTTGCTTGAAATTGTGTTTATACCTGTTAGTGATTCTGGTTTTGGCTTTGTTAATGGTATTGAAGTGTTTTCTGCTCCTGAAGATTTTGTTGTAGATTATGGAGCTAGATTTGTTGACCCTTTTGGTGTTAGGGAATACAAGAATCTTTCTTACGATGTTTTAGAAACGGTTCATAGGATTAATGTTGGAGGTGTGAAATTAACTCCATTTAATGATACCCTTTGGAGGACATGGATTCCTGATAGTGATTTTCTGGTTTTTAAGGAAGCAGCTAAGGCTGTAGTGAGCACTCACACACCAGATTATCAGAAAGGAGGCGCGACTCGAGAGATCGCACCCGATAGTGTTTATATGACTGCTCAGGAGATGAATAGGGATAATCAATCTATTTTAGCTTCACAGTTCAACATAACATGGAATTTTCAAGTGGCTTCTGTTGGTGTTCGACACTTGGTTCGGCTGCATTTTTGCGATATTGTTAGTCCTTCTCTTAATTTGCTATACTTTGATGTGTATATTAATAGTTATTCTGCGTATAAGGATGTTGATTTGTCGTCGCTTACTTTCCATATGCTCACATCTCCGGTTTATGTTGATTTCGTTGTTGATTCTGATGACTCGGGTGTCATTCAAATAAGTGTTGGTCCTTCTAGTCTTAGTAGTTCAATGAGGATAAATGCGATACTTAATGGCGCCGAGATTATGAAGGTTGTGAGTGTTATGGATTTGAGTTCACATGTTGCTTCTAGGAAGAAAAGGTTGTTGGAGGTGTTAGTTGGTTCAATTGTTGGTGGAATTATTGTTTTACTTTTAGTTATAGCTGTTTTTCTAGTTTGTCGCGGACGCAGGAAGAAGAAACCAAAACTAAGGACAGTTGAAAGTGTTGGATGGACGCCTTTACGCATGTTTGGAGGGAGTTCACTTAGCAGAATGTCAGAAGGGACAGCTTATCAGTCGCCCGGTTCGTATGGACATTTCGGCTTGAAAATTGCTTTTGCTGATATACAATTAGCAACTAACAATTTCGATGAAAGTCTAGTTATAGGATCGGGCGGATTTGGTATGGTTTACAAAGGTGTTCTAAGAGACAATTTGAAAGTTGCTGTCAAAAGAGGCATGCCCGGATCAAGACAAGGCCTACCTGAATTCCAAAGTGAAATAACAATTTTATCCAATATCCGCCATCGCCATCTTGTTTCTCTAGTTGGATTCTGCGAAGAGAATTCGGAAATGATACTTGTCTATGAGTATGTAGAAAGAGGGCCACTCAAAGATCATCTATATGGTTCAGAAGGACTAGTTCAACCTTTGTCGTGGAAGAAGCGTCTCGAGATATGCATTGGCGCGGCTCGAGGTCTACACTATCTTCACACAGGTTTCACACAAGGAATCATCCACCGCGACATTAAATCAACCAACATTTTACTCGACGAAAACTACATTGCTAAGGTTGCTGATTTTGGTCTTTCGAGATCAGGACCTTGTATCGATGAAACACACGTGAGTACTAATGTGAAAGGTAGTTTCGGTTATCTTGATCCAGAGTATTTTCGAAGGCAACAGCTTACGGATAAATCAGATGTTTATTCGTTCGGCGTTGTTCTCTTCGAGGTTCTTTGTGTTAGACCTGCTGTTGATCCACAACTTGACAGGGAACAAGTGAATTTAGCAGAATGGGCTCTTAAATGGCAGAAGAAAGGTATGTTGGAACACATTATTGATCCTTATCTTGTTGGTAAGATCAAAGAAAGCTCATTGAAGAAATTTTCTGAAACCGCGGAGAAATGTTTGGCCGAATACGGCGTTGATAGGCCGTCTATGGGTGATGTGTTATGGAATTTGGAACATTCACTTCAGCTTCAAGAAAGTGATCAAGAAGTGAATGTCACATATGCTAATAGCATTGGTGATTCAGAAGTGAATGTTACATCTTCTATAGTTCTTAGGAATCCTCCTAGCAACATAAGATTAGAGGGAGATTATGATAACAATTATTCTGATGTAAGTACTACTAAAGTTTTTTCTCAACTAATCACTAGGGAAGCTCGATGA | 2523 | 0.3849 | MDTQNLTIHFILLIFIPFSFSSFIPVDNYLLNCGSNTNVTLFNRLFIGDDFTNKGSILISADQSISSTNQNPPPNLSTLYQTARVFTKMGSYRFLLKQNGTFFVRFLFSSFKAQGFDLKDANFSVLVGGKLILNSFNPKAGTNDEVIKEFVMKVESNLLEIVFIPVSDSGFGFVNGIEVFSAPEDFVVDYGARFVDPFGVREYKNLSYDVLETVHRINVGGVKLTPFNDTLWRTWIPDSDFLVFKEAAKAVVSTHTPDYQKGGATREIAPDSVYMTAQEMNRDNQSILASQFNITWNFQVASVGVRHLVRLHFCDIVSPSLNLLYFDVYINSYSAYKDVDLSSLTFHMLTSPVYVDFVVDSDDSGVIQISVGPSSLSSSMRINAILNGAEIMKVVSVMDLSSHVASRKKRLLEVLVGSIVGGIIVLLLVIAVFLVCRGRRKKKPKLRTVESVGWTPLRMFGGSSLSRMSEGTAYQSPGSYGHFGLKIAFADIQLATNNFDESLVIGSGGFGMVYKGVLRDNLKVAVKRGMPGSRQGLPEFQSEITILSNIRHRHLVSLVGFCEENSEMILVYEYVERGPLKDHLYGSEGLVQPLSWKKRLEICIGAARGLHYLHTGFTQGIIHRDIKSTNILLDENYIAKVADFGLSRSGPCIDETHVSTNVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCVRPAVDPQLDREQVNLAEWALKWQKKGMLEHIIDPYLVGKIKESSLKKFSETAEKCLAEYGVDRPSMGDVLWNLEHSLQLQESDQEVNVTYANSIGDSEVNVTSSIVLRNPPSNIRLEGDYDNNYSDVSTTKVFSQLITREAR | 840 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g04459 | 840 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 621 | 633 | IPR008271 | GO:0004672|GO:0006468 | |
Vifa1g04459 | 840 | FunFam | Receptor-like protein kinase FERONIA | 575 | 787 | - | - | |
Vifa1g04459 | 840 | Pfam | Protein tyrosine and serine/threonine kinase | 504 | 767 | IPR001245 | GO:0004672|GO:0006468 | |
Vifa1g04459 | 840 | PANTHER | OS07G0166700 PROTEIN | 486 | 778 | IPR045272 | GO:0004714|GO:0006468 | |
Vifa1g04459 | 840 | ProSitePatterns | Protein kinases ATP-binding region signature. | 505 | 527 | IPR017441 | GO:0005524 | |
Vifa1g04459 | 840 | SUPERFAMILY | Protein kinase-like (PK-like) | 472 | 770 | IPR011009 | - | |
Vifa1g04459 | 840 | Gene3D | Transferase(Phosphotransferase) domain 1 | 575 | 797 | - | - | |
Vifa1g04459 | 840 | FunFam | Putative receptor-like protein kinase | 28 | 183 | - | - | |
Vifa1g04459 | 840 | ProSiteProfiles | Protein kinase domain profile. | 499 | 776 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g04459 | 840 | CDD | STKc_IRAK | 505 | 772 | - | - | |
Vifa1g04459 | 840 | Gene3D | Phosphorylase Kinase; domain 1 | 464 | 574 | - | - | |
Vifa1g04459 | 840 | Gene3D | - | 210 | 396 | - | - | |
Vifa1g04459 | 840 | Gene3D | - | 28 | 184 | - | - | |
Vifa1g04459 | 840 | SMART | serkin_6 | 499 | 776 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g04459 | 840 | FunFam | receptor-like protein kinase FERONIA | 464 | 574 | - | - | |
Vifa1g04459 | 840 | Pfam | Malectin-like domain | 31 | 394 | IPR024788 | - | |
Vifa1g04459 | 840 | FunFam | Receptor-like protein kinase FERONIA | 210 | 396 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g04459 | Vifa-Chr1 | 692240609 | 692243131 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g04459 | 23 | 840 | Receptor kinase-like Gene Family | AT3G46290 | 49.346 | 0.0 | 734 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CrRLK1L-1 | Vifa1g04459 | Malectin_like | 1.9e-31 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g04459 | - | - | psat:127128324 | 1515.75 |